RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SIAH1Q8IUQ4 282 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 NSUN7Q8NE18 718 aaKnown RBP10.68□□□□□ -0.7
ACTN1-218ENST00000556343 ACER1Q8TDN7 264 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 CTDP1Q9Y5B0 961 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-218ENST00000556343 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 UBE2Q2LH0YL09 131 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 TRAF5O00463 557 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 PLA2G6O60733 806 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 TOMM70O94826 608 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 NDUFB10O96000 172 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 ECE1P42892 770 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 PPIL2Q13356 520 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 LDLRAD1Q5T700 205 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 CLEC10AQ8IUN9 316 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 FAM177A1Q8N128 213 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 CCDC82Q8N4S0 544 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 CCDC12Q8WUD4 166 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 SPZ1Q9BXG8 430 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 ELP3Q9H9T3 547 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 SNCAIPQ9Y6H5 919 aa10.67□□□□□ -0.7
ACTN1-218ENST00000556343 V9GY48 417 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-218ENST00000556343 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 TMEM232C9JQI7 657 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 JAK2O60674 1132 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 PLEKHA8P1O95397 391 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 CTDNEP1O95476 244 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 ITGBL1O95965 494 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 FDX1P10109 184 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 STAT2P52630 851 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 FSTL1Q12841 308 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 PABPC4Q13310 644 aaKnown RBP eCLIP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 SAFBQ15424 915 aaKnown RBP eCLIP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 ZYXQ15942 572 aaKnown RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 NTRK3Q16288 839 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 DLK2Q6UY11 383 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 FASTKD5Q7L8L6 764 aaKnown RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 SRBD1Q8N5C6 995 aaKnown RBP10.66□□□□□ -0.7
ACTN1-218ENST00000556343 C8orf76Q96K31 380 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 ALG1Q9BT22 464 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 BRMS1Q9HCU9 246 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 AFG3L2Q9Y4W6 797 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 ATP6V1DQ9Y5K8 247 aa10.66□□□□□ -0.7
ACTN1-218ENST00000556343 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
ACTN1-218ENST00000556343 TRIM75PA6NK02 468 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 hCG_1984214I3L0E3 225 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 KIF3CO14782 793 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 STX6O43752 255 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 ST3GAL1Q11201 340 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 SNAPC2Q13487 334 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 MTMR2Q13614 643 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
ACTN1-218ENST00000556343 SH3D19Q5HYK7 790 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 FAM83BQ5T0W9 1011 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 SYDE2Q5VT97 1194 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 NBPF11Q86T75 865 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 STAG2Q8N3U4 1231 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 ZNF713Q8N859 430 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-218ENST00000556343 PHKBQ93100 1093 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 C12orf42Q96LP6 360 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 GLT8D2Q9H1C3 349 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 FZD1Q9UP38 647 aa10.65□□□□□ -0.7
ACTN1-218ENST00000556343 POLR2AP24928 1970 aaKnown RBP10.65□□□□□ -0.71
ACTN1-218ENST00000556343 SSC5DA1L4H1 1573 aa10.65□□□□□ -0.71
ACTN1-218ENST00000556343 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 ZBED4O75132 1171 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 SYT1P21579 422 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 OSBPP22059 807 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 CALML3P27482 149 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 GTF2A2P52657 109 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 HMGCS2P54868 508 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 HUNKP57058 714 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 PFKFB3Q16875 520 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-218ENST00000556343 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms