RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PLXNC1O60486 1568 aa5.04□□□□□ -1.6
EFCAB11-210ENST00000556078 MAST1Q9Y2H9 1570 aa5.04□□□□□ -1.6
EFCAB11-210ENST00000556078 UBR1Q8IWV7 1749 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 TEX51A0A1B0GUA7 166 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 MYOCOSA0A1B0GUC4 107 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 CAP2P40123 477 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 FGD1P98174 961 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 PDE3BQ13370 1112 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 ZNF507Q8TCN5 953 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 COX4I2Q96KJ9 171 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 FAM129BQ96TA1 746 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 SLC6A17Q9H1V8 727 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 SP110Q9HB58 689 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 GCM1Q9NP62 436 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 CSADQ9Y600 493 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 RTEL1-TNFRSF6BF6WH68 1400 aa5.03□□□□□ -1.6
EFCAB11-210ENST00000556078 ATP7AQ04656 1500 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 DCDC2CA8MYV0 355 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 RFXAPO00287 272 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 EIF1AYO14602 144 aaKnown RBP5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 TRIM37O94972 964 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 ESR1P03372 595 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 HK2P52789 917 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 FCGRTP55899 365 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 SCARA3Q6AZY7 606 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 ZNF746Q6NUN9 644 aaPredicted RBP5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 C12orf40Q86WS4 652 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 LILRA2Q8N149 483 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 C8orf37Q96NL8 207 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 PPP4R2Q9NY27 417 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 ZSWIM5Q9P217 1185 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 KDM5DQ9BY66 1539 aa5.02□□□□□ -1.61
EFCAB11-210ENST00000556078 LRRC9Q6ZRR7 1453 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 SAMD9Q5K651 1589 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 BLMP54132 1417 aaPredicted RBP5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 TMEM88BA6NKF7 163 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 AKAP8O43823 692 aaKnown RBP5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 SASH1O94885 1247 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 MPRIPQ6WCQ1 1025 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 MFSD2AQ8NA29 543 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 CRELD1Q96HD1 420 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 ADAMTS10Q9H324 1103 aa5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 ZNF552Q9H707 407 aaPredicted RBP5.01□□□□□ -1.61
EFCAB11-210ENST00000556078 SHANK3Q9BYB0 1731 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 SIPA1L2Q9P2F8 1722 aaPredicted RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 OTOL1A6NHN0 477 aaPredicted RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 ABL1P00519 1130 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 TRHRP34981 398 aaPredicted RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 KIR3DL1P43629 444 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 ZNF211Q13398 564 aaPredicted RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 SLBPQ14493 270 aaKnown RBP eCLIP5□□□□□ -1.61
EFCAB11-210ENST00000556078 R3HDM1Q15032 1099 aaKnown RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 PHLDB3Q6NSJ2 640 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 ZNF605Q86T29 641 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 PDZD8Q8NEN9 1154 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 CITED4Q96RK1 184 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 MIPEPQ99797 713 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 ARID3AQ99856 593 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
EFCAB11-210ENST00000556078 ANO2Q9NQ90 1003 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 EGFL7Q9UHF1 273 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 TNRQ92752 1358 aa5□□□□□ -1.61
EFCAB11-210ENST00000556078 GLI3P10071 1580 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 SAMD9LQ8IVG5 1584 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 ARHGAP5Q13017 1502 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 NDUFB5O43674 189 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 ICMTO60725 284 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 LTKP29376 864 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 NR0B2Q15466 257 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 PIWIL2Q8TC59 973 aaKnown RBP4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 EPS8L3Q8TE67 593 aaKnown RBP4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 CBX8Q9HC52 389 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 LRRIQ1Q96JM4 1722 aa4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 TNS1Q9HBL0 1735 aaKnown RBP4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 MARF1Q9Y4F3 1742 aaKnown RBP4.99□□□□□ -1.61
EFCAB11-210ENST00000556078 ATRNO75882 1429 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 SPHKAPQ2M3C7 1700 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 CHD2O14647 1828 aaKnown RBP4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 PLEKHD1A6NEE1 506 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 CBX7O95931 251 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 BMP6P22004 513 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 CYP7A1P22680 504 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 TNK2Q07912 1038 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 EFEMP1Q12805 493 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 TMEM132EQ6IEE7 984 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 LETMD1Q6P1Q0 360 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 GGT6Q6P531 493 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 RIN3Q8TB24 985 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 GRIN3AQ8TCU5 1115 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 INTS4Q96HW7 963 aaKnown RBP4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 C19orf44Q9H6X5 657 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 SAMM50Q9Y512 469 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 UNC13BO14795 1591 aa4.98□□□□□ -1.61
EFCAB11-210ENST00000556078 FAM135AQ9P2D6 1515 aa4.97□□□□□ -1.61
EFCAB11-210ENST00000556078 NCOA2Q15596 1464 aa4.97□□□□□ -1.61
EFCAB11-210ENST00000556078 FITM1A5D6W6 292 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms