RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	VWA5B2	Q8N398	1253 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	MIGA1	Q8NAN2	632 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	NSUN4	Q96CB9	384 aa	Known RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	IL17RA	Q96F46	866 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	GPR101	Q96P66	508 aa	Predicted RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	STRBP	Q96SI9	672 aa	Known RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	UPF3B	Q9BZI7	483 aa	Known RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	PDGFD	Q9GZP0	370 aa	Predicted RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	VPS33B	Q9H267	617 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	RNF41	Q9H4P4	317 aa	Predicted RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	ARMT1	Q9H993	441 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TIMMDC1	Q9NPL8	285 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	LIMCH1	Q9UPQ0	1083 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	JAG2	Q9Y219	1238 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	SUGT1	Q9Y2Z0	365 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	CD2AP	Q9Y5K6	639 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	C10orf71	Q711Q0	1435 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	NRXN2	Q9P2S2	1712 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TUBGCP6	Q96RT7	1819 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	FAM205A	Q6ZU69	1335 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	PPIP5K2	O43314	1243 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	FGA	P02671	866 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	CYP21A2	P08686	494 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	RPS6KB1	P23443	525 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	LMOD1	P29536	600 aa	Predicted RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	USP5	P45974	858 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	ATP1A2	P50993	1020 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	TTLL5	Q6EMB2	1281 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	GIMAP6	Q6P9H5	292 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	NOL8	Q76FK4	1167 aa	Known RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	DHX32	Q7L7V1	743 aa	Known RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	IFNL3	Q8IZI9	196 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	TPCN2	Q8NHX9	752 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	NCOA7	Q8NI08	942 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	PPP1R12C	Q9BZL4	782 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	KRT23	Q9C075	422 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	CNNM2	Q9H8M5	875 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	CWC22	Q9HCG8	908 aa	Known RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	GPAM	Q9HCL2	828 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	SH2B1	Q9NRF2	756 aa	Predicted RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	TOMM22	Q9NS69	142 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	DNAAF2	Q9NVR5	837 aa	Known RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	HRH3	Q9Y5N1	445 aa		6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.55	□□□□□ -1.36
ATL1-208	ENST00000556067	ZMYM6	O95789	1325 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	IRS2	Q9Y4H2	1338 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ERICH2	A1L162	156 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	MINDY4B	A8MYZ0	360 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	SPATA31C2	B4DYI2	1134 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067		E7EWF7	191 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ECE2	O60344	883 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	CHGB	P05060	677 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	RASA1	P20936	1047 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	RFX1	P22670	979 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	PRDX5	P30044	214 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	MCM5	P33992	734 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	PLA2G4A	P47712	749 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	SMTN	P53814	917 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	AK2	P54819	239 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	CLDN10	P78369	228 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	SART3	Q15020	963 aa	Known RBP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	C4orf17	Q53FE4	359 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	STRIP1	Q5VSL9	837 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	MFSD6	Q6ZSS7	791 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	LCORL	Q8N3X6	602 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	LARGE2	Q8N3Y3	721 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	OGFOD1	Q8N543	542 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	PSMD1	Q99460	953 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	SLK	Q9H2G2	1235 aa	Predicted RBP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ZNF287	Q9HBT7	754 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	SPON1	Q9HCB6	807 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ATP8A2	Q9NTI2	1148 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ZNF358	Q9NW07	568 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	AATF	Q9NY61	560 aa	Known RBP eCLIP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	CHMP5	Q9NZZ3	219 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	KIAA1024	Q9UPX6	916 aa		6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.54	□□□□□ -1.36
ATL1-208	ENST00000556067	TAF1	P21675	1872 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	MROH7-TTC4	A0A0A0MT08	1334 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	DUOX1	Q9NRD9	1551 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	COL4A1	P02462	1669 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	GSG1L2	A8MUP6	293 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	BACH1	O14867	736 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	PC	P11498	1178 aa	Known RBP	6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	NT5C2	P49902	561 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	RBM5	P52756	815 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	HAND2	P61296	217 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	FKBP1A	P62942	108 aa	Known RBP	6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	DYNLL1	P63167	89 aa	Known RBP	6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	KIAA2012	Q0VF49	1180 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	AOC3	Q16853	763 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	ADCK5	Q3MIX3	580 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	OLFM4	Q6UX06	510 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	SYNE3	Q6ZMZ3	975 aa		6.53	□□□□□ -1.36
ATL1-208	ENST00000556067	SV2A	Q7L0J3	742 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms