RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CRACR2AQ9BSW2 395 aa19.98■□□□□ 0.79
RCCD1-204ENST00000555737 AGPAT5Q9NUQ2 364 aa19.98■□□□□ 0.79
RCCD1-204ENST00000555737 PDE8AO60658 829 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 SLC7A5Q01650 507 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 ENOX2Q16206 610 aaKnown RBP19.97■□□□□ 0.79
RCCD1-204ENST00000555737 GSDMAQ96QA5 445 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 MUM1L1Q5H9M0 696 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 KRT26Q7Z3Y9 468 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 HPS3Q969F9 1004 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 STK36Q9NRP7 1315 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 MAGEB6P1A0A0J9YX57 407 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
RCCD1-204ENST00000555737 UIMC1Q96RL1 719 aa19.97■□□□□ 0.79
RCCD1-204ENST00000555737 IPO7O95373 1038 aaKnown RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 MYBL2P10244 700 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 NAP1L1P55209 391 aaKnown RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 ATP2B2Q01814 1243 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 BICDL1Q6ZP65 573 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 CCDC24Q8N4L8 307 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 ZNF579Q8NAF0 562 aaKnown RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 ZSCAN10Q96SZ4 725 aaPredicted RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 EHD2Q9NZN4 543 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 REXO2Q9Y3B8 237 aaKnown RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 USP17L12C9JPN9 530 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 USP17L21D6R901 530 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 POTEB2H3BUK9 544 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 STAG1Q8WVM7 1258 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 LACRTQ9GZZ8 138 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 RNF41Q9H4P4 317 aaPredicted RBP19.96■□□□□ 0.79
RCCD1-204ENST00000555737 SAR1BQ9Y6B6 198 aa19.96■□□□□ 0.79
RCCD1-204ENST00000555737 RPN1P04843 607 aaKnown RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 IDEP14735 1019 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 EZH2Q15910 746 aaKnown RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 LRRC31Q6UY01 552 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 JAKMIP2Q96AA8 810 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 CPVLQ9H3G5 476 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 ARID4AP29374 1257 aaPredicted RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 GGCXP38435 758 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 PBX1P40424 430 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 WHAMMP3Q1A5X7 153 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 CCDC178Q5BJE1 867 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 CTCFLQ8NI51 663 aaPredicted RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 AFAP1L1Q8TED9 768 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 MAGEC2Q9UBF1 373 aaPredicted RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 EIF3CLB5ME19 914 aaKnown RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 RNASE9P60153 205 aaKnown RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 MSANTD4Q8NCY6 345 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 EIF3CQ99613 913 aaKnown RBP19.95■□□□□ 0.78
RCCD1-204ENST00000555737 GBP3Q9H0R5 595 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 ACBD3Q9H3P7 528 aa19.95■□□□□ 0.78
RCCD1-204ENST00000555737 RCCD1A6NED2 376 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 CYP2D6P10635 497 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 IL17AQ16552 155 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 OR8K1Q8NGG5 319 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 SPATA20Q8TB22 786 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 STIM1Q13586 685 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 TMTC2Q8N394 836 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
RCCD1-204ENST00000555737 FBXO3Q9UK99 471 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 RAB21Q9UL25 225 aa19.94■□□□□ 0.78
RCCD1-204ENST00000555737 PLEKP08567 350 aaPredicted RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 SUSD4Q5VX71 490 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 MICALL1Q8N3F8 863 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 SRBD1Q8N5C6 995 aaKnown RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 PHF20Q9BVI0 1012 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 TSPYL1Q9H0U9 437 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 SLIT3O75094 1523 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 TMEM94Q12767 1356 aa19.93■□□□□ 0.78
RCCD1-204ENST00000555737 IBSPP21815 317 aaPredicted RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 IGHMBP2P38935 993 aaKnown RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 MTIF2P46199 727 aaKnown RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 MYO5AQ9Y4I1 1855 aaKnown RBP19.93■□□□□ 0.78
RCCD1-204ENST00000555737 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
RCCD1-204ENST00000555737 IVLP07476 585 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 PTPROQ16827 1216 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 SND1Q7KZF4 910 aaKnown RBP eCLIP19.92■□□□□ 0.78
RCCD1-204ENST00000555737 FAM71BQ8TC56 605 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 HDAC7Q8WUI4 952 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 WDR17Q8IZU2 1322 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 CCT5P48643 541 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 TBC1D8BQ0IIM8 1120 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 FERMT2Q96AC1 680 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
RCCD1-204ENST00000555737 UBA7P41226 1012 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 HERVK_113P62684 666 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 ALX1Q15699 326 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 E2F4Q16254 413 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 HNRNPLLQ8WVV9 542 aaKnown RBP19.91■□□□□ 0.78
RCCD1-204ENST00000555737 SLC4A9Q96Q91 983 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 ZNHIT6Q9NWK9 470 aaKnown RBP19.91■□□□□ 0.78
RCCD1-204ENST00000555737 SAMM50Q9Y512 469 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 PDE2AO00408 941 aaPredicted RBP19.91■□□□□ 0.78
RCCD1-204ENST00000555737 LIG3P49916 1009 aa19.91■□□□□ 0.78
RCCD1-204ENST00000555737 KCTD16Q68DU8 428 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms