RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PLCG1P19174 1290 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 LMNB2Q03252 620 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 CAMK2GQ13555 558 aaPredicted RBP7.04□□□□□ -1.28
SNX6-204ENST00000555541 SYT8Q8NBV8 401 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 RNF141Q8WVD5 230 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 BORCS6Q96GS4 357 aa7.04□□□□□ -1.28
SNX6-204ENST00000555541 POLR3KQ9Y2Y1 108 aaPredicted RBP7.04□□□□□ -1.28
SNX6-204ENST00000555541 SHISA3A0PJX4 238 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 OR14I1A6ND48 311 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 CHURC1-FNTBB4DL54 471 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 F13A1P00488 732 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 PF4P02776 101 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 LTKP29376 864 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 YBX1P67809 324 aaKnown RBP7.03□□□□□ -1.28
SNX6-204ENST00000555541 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
SNX6-204ENST00000555541 ZXDCQ2QGD7 858 aaPredicted RBP7.03□□□□□ -1.28
SNX6-204ENST00000555541 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
SNX6-204ENST00000555541 FAM13CQ8NE31 585 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 GATAD2BQ8WXI9 593 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 RHOVQ96L33 236 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 ADAM7Q9H2U9 754 aa7.03□□□□□ -1.28
SNX6-204ENST00000555541 F6X3S4 739 aa7.02□□□□□ -1.29
SNX6-204ENST00000555541 VMACQ2NL98 169 aa7.02□□□□□ -1.29
SNX6-204ENST00000555541 TMC4Q7Z404 712 aa7.02□□□□□ -1.29
SNX6-204ENST00000555541 ZDHHC14Q8IZN3 488 aa7.02□□□□□ -1.29
SNX6-204ENST00000555541 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
SNX6-204ENST00000555541 LUC7LQ9NQ29 371 aaKnown RBP7.02□□□□□ -1.29
SNX6-204ENST00000555541 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
SNX6-204ENST00000555541 GARTP22102 1010 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 VIPR1P32241 457 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 DUSP4Q13115 394 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 SPATS1Q496A3 300 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 KCNH3Q9ULD8 1083 aa7.01□□□□□ -1.29
SNX6-204ENST00000555541 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
SNX6-204ENST00000555541 YARSP54577 528 aaKnown RBP7□□□□□ -1.29
SNX6-204ENST00000555541 ADGRF1Q5T601 910 aa7□□□□□ -1.29
SNX6-204ENST00000555541 FRMD5Q7Z6J6 570 aa7□□□□□ -1.29
SNX6-204ENST00000555541 FBXO33Q7Z6M2 555 aa7□□□□□ -1.29
SNX6-204ENST00000555541 FAM129CQ86XR2 697 aa7□□□□□ -1.29
SNX6-204ENST00000555541 SP8Q8IXZ3 490 aa7□□□□□ -1.29
SNX6-204ENST00000555541 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
SNX6-204ENST00000555541 CRTAC1Q9NQ79 661 aa7□□□□□ -1.29
SNX6-204ENST00000555541 CDR1P51861 262 aa6.99□□□□□ -1.29
SNX6-204ENST00000555541 TAGLNQ01995 201 aaKnown RBP6.99□□□□□ -1.29
SNX6-204ENST00000555541 PSMD2Q13200 908 aa6.99□□□□□ -1.29
SNX6-204ENST00000555541 SIRT2Q8IXJ6 389 aa6.99□□□□□ -1.29
SNX6-204ENST00000555541 NRDCO43847 1150 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 HTR3BO95264 441 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNX6-204ENST00000555541 IGDCC3Q8IVU1 814 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 USHBP1Q8N6Y0 703 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 LINC01356Q8N9X3 169 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 CCDC74BQ96LY2 380 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
SNX6-204ENST00000555541 GRIN3BO60391 1043 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 FBXO27Q8NI29 283 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 MZB1Q8WU39 189 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 KIF2CQ99661 725 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 ASPNQ9BXN1 380 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 SIRT5Q9NXA8 310 aa6.97□□□□□ -1.29
SNX6-204ENST00000555541 PRICKLE3O43900 615 aaPredicted RBP6.96□□□□□ -1.3
SNX6-204ENST00000555541 ERICH6BQ5W0A0 696 aa6.96□□□□□ -1.3
SNX6-204ENST00000555541 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.3
SNX6-204ENST00000555541 MYRFQ9Y2G1 1151 aa6.96□□□□□ -1.3
SNX6-204ENST00000555541 PATL2C9JE40 543 aaKnown RBP6.95□□□□□ -1.3
SNX6-204ENST00000555541 USP2O75604 605 aaPredicted RBP6.95□□□□□ -1.3
SNX6-204ENST00000555541 UBOX5O94941 541 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 BPNT1O95861 308 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 INSRRP14616 1297 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 REC114Q7Z4M0 266 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 HDAC8Q9BY41 377 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 KCNQ5Q9NR82 932 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
SNX6-204ENST00000555541 TMEM82A0PJX8 343 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 RGS13O14921 159 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 PNLIPP16233 465 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 SDHBP21912 280 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 GBP2P32456 591 aaPredicted RBP6.94□□□□□ -1.3
SNX6-204ENST00000555541 KIR2DL1P43626 348 aaPredicted RBP6.94□□□□□ -1.3
SNX6-204ENST00000555541 KIR2DL2P43627 348 aaPredicted RBP6.94□□□□□ -1.3
SNX6-204ENST00000555541 MPP2Q14168 576 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 ENOX1Q8TC92 643 aaKnown RBP6.94□□□□□ -1.3
SNX6-204ENST00000555541 CRELD1Q96HD1 420 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 KLHL14Q9P2G3 628 aa6.94□□□□□ -1.3
SNX6-204ENST00000555541 TNNI2P48788 182 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 CAP1Q01518 475 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 RTP5Q14D33 572 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 LDHDQ86WU2 507 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 GOLM1Q8NBJ4 401 aa6.93□□□□□ -1.3
SNX6-204ENST00000555541 SYTL5Q8TDW5 730 aaPredicted RBP6.93□□□□□ -1.3
SNX6-204ENST00000555541 SYTL4Q96C24 671 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms