RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
IFT43-209ENST00000555305 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 PDHBP11177 359 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 ZNF165P49910 485 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
IFT43-209ENST00000555305 TTC38Q5R3I4 469 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
IFT43-209ENST00000555305 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
IFT43-209ENST00000555305 KCNH3Q9ULD8 1083 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 ESYT2A0FGR8 921 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
IFT43-209ENST00000555305 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 CEP57L1Q8IYX8 460 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 MTMR14Q8NCE2 650 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 MKL1Q969V6 931 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 CCDC39Q9UFE4 941 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 PSME4Q14997 1843 aa16.61■□□□□ 0.25
IFT43-209ENST00000555305 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 CCDC194A0A1B0GVG4 234 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 CYTH3O43739 400 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 ORC2Q13416 577 aaPredicted RBP16.6■□□□□ 0.25
IFT43-209ENST00000555305 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
IFT43-209ENST00000555305 PPP1R18Q6NYC8 613 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 CLIP2Q9UDT6 1046 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 USP25Q9UHP3 1055 aa16.6■□□□□ 0.25
IFT43-209ENST00000555305 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 STXBP3O00186 592 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 LAD1O00515 517 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
IFT43-209ENST00000555305 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 DLGAP5Q15398 846 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 GMLQ99445 158 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 BPIFA3Q9BQP9 254 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 MYO1BO43795 1136 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 NAPAP54920 295 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
IFT43-209ENST00000555305 TCP10Q12799 353 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 JDP2Q8WYK2 163 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
IFT43-209ENST00000555305 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 PSMD14O00487 310 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 ZNF543Q08ER8 600 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 KRBA2Q6ZNG9 492 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 CNNM3Q8NE01 707 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 DCAF4Q8WV16 495 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 GLT8D2Q9H1C3 349 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 TDRD3Q9H7E2 651 aaKnown RBP16.58■□□□□ 0.24
IFT43-209ENST00000555305 CBX8Q9HC52 389 aa16.58■□□□□ 0.24
IFT43-209ENST00000555305 ZNF277Q9NRM2 450 aaPredicted RBP16.58■□□□□ 0.24
IFT43-209ENST00000555305 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
IFT43-209ENST00000555305 M0R2N6 131 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 TPM3P06753 285 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 GOLGA8HP0CJ92 632 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 TNIP1Q15025 636 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
IFT43-209ENST00000555305 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
IFT43-209ENST00000555305 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 MYH8P13535 1937 aa16.57■□□□□ 0.24
IFT43-209ENST00000555305 GREB1LQ9C091 1923 aaPredicted RBP16.57■□□□□ 0.24
IFT43-209ENST00000555305 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 FAM151AQ8WW52 585 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 CLIC6Q96NY7 704 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 BECN2A8MW95 431 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 GOLGA6L6A8MZA4 724 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 RAD17O75943 681 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 ADCY5O95622 1261 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
IFT43-209ENST00000555305 CACNB3P54284 484 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 TPM4P67936 248 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 ABCB5Q2M3G0 1257 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
IFT43-209ENST00000555305 FAM83AQ86UY5 434 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 LRRC47Q8N1G4 583 aaKnown RBP16.56■□□□□ 0.24
IFT43-209ENST00000555305 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 CSRNP1Q96S65 589 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 DNAJC18Q9H819 358 aa16.56■□□□□ 0.24
IFT43-209ENST00000555305 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms