RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 MIGA2Q7L4E1 593 aa27.69■■■□□ 2.02
RCCD1-203ENST00000555155 GPKOWQ92917 476 aaPredicted RBP eCLIP27.69■■■□□ 2.028e-10■□□□□ 8.7
RCCD1-203ENST00000555155 TAF1DQ9H5J8 278 aaPredicted RBP27.69■■■□□ 2.02
RCCD1-203ENST00000555155 EEF2P13639 858 aaKnown RBP27.68■■■□□ 2.02
RCCD1-203ENST00000555155 XBP1P17861 261 aa27.68■■■□□ 2.02
RCCD1-203ENST00000555155 NR5A1Q13285 461 aa27.68■■■□□ 2.02
RCCD1-203ENST00000555155 PFKFB3Q16875 520 aaPredicted RBP27.68■■■□□ 2.02
RCCD1-203ENST00000555155 TEPSINQ96N21 525 aa27.68■■■□□ 2.02
RCCD1-203ENST00000555155 GH2P01242 217 aa27.68■■■□□ 2.02
RCCD1-203ENST00000555155 U2AF2P26368 475 aaKnown RBP eCLIP27.68■■■□□ 2.023e-10■■■□□ 17.3
RCCD1-203ENST00000555155 UBA5Q9GZZ9 404 aa27.68■■■□□ 2.02
RCCD1-203ENST00000555155 WDR90Q96KV7 1748 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 IQCA1LA6NCM1 817 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 USP50Q70EL3 339 aaPredicted RBP27.67■■■□□ 2.02
RCCD1-203ENST00000555155 APOBEC3FQ8IUX4 373 aaKnown RBP27.67■■■□□ 2.02
RCCD1-203ENST00000555155 PGBD1Q96JS3 809 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 PHF20Q9BVI0 1012 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 VAT1LQ9HCJ6 419 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 GPCPD1Q9NPB8 672 aa27.67■■■□□ 2.02
RCCD1-203ENST00000555155 HERC5Q9UII4 1024 aaKnown RBP27.67■■■□□ 2.02
RCCD1-203ENST00000555155 ICA1Q05084 483 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 PRAMEF18Q5VWM3 479 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 TMEM179Q6ZVK1 233 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 GOLGA6L4A6NEF3 574 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 ZSCAN23Q3MJ62 389 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 ATL3Q6DD88 541 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 NOSTRINQ8IVI9 506 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 KANSL2Q9H9L4 492 aa27.66■■■□□ 2.02
RCCD1-203ENST00000555155 SCN4AP35499 1836 aa27.65■■■□□ 2.02
RCCD1-203ENST00000555155 EAPPQ56P03 285 aaPredicted RBP27.65■■■□□ 2.02
RCCD1-203ENST00000555155 HOMER1Q86YM7 354 aa27.65■■■□□ 2.02
RCCD1-203ENST00000555155 LZTS2Q9BRK4 669 aa27.65■■■□□ 2.02
RCCD1-203ENST00000555155 RCOR1Q9UKL0 485 aa27.65■■■□□ 2.02
RCCD1-203ENST00000555155 ISY1Q9ULR0 285 aaKnown RBP27.65■■■□□ 2.02
RCCD1-203ENST00000555155 DEKP35659 375 aaKnown RBP27.64■■■□□ 2.02
RCCD1-203ENST00000555155 SIAH1Q8IUQ4 282 aa27.64■■■□□ 2.02
RCCD1-203ENST00000555155 RTEL1Q9NZ71 1219 aa27.64■■■□□ 2.02
RCCD1-203ENST00000555155 CCDC96Q2M329 555 aa27.64■■■□□ 2.01
RCCD1-203ENST00000555155 DLK2Q6UY11 383 aa27.64■■■□□ 2.01
RCCD1-203ENST00000555155 FOXP1Q9H334 677 aaPredicted RBP27.64■■■□□ 2.01
RCCD1-203ENST00000555155 PITPNM2Q9BZ72 1349 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 KRT2P35908 639 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 NLRP5P59047 1200 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 STK38Q15208 465 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 NBPF12Q5TAG4 269 aaPredicted RBP27.63■■■□□ 2.01
RCCD1-203ENST00000555155 KCTD1Q719H9 257 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 HEATR3Q7Z4Q2 680 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 SPZ1Q9BXG8 430 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 RRAGCQ9HB90 399 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 CABP5Q9NP86 173 aa27.63■■■□□ 2.01
RCCD1-203ENST00000555155 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.63■■■□□ 2.01
RCCD1-203ENST00000555155 FAM205CA6NFA0 338 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 ADAMTS3O15072 1205 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 SNHG28P0DPA3 235 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 ASPRV1Q53RT3 343 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 ANO1Q5XXA6 986 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 WWC2Q6AWC2 1192 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 NYAP2Q9P242 653 aa27.62■■■□□ 2.01
RCCD1-203ENST00000555155 POLR2AP24928 1970 aaKnown RBP27.62■■■□□ 2.01
RCCD1-203ENST00000555155 POTEIP0CG38 1075 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 POTEJP0CG39 1038 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 LIG1P18858 919 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 ME1P48163 572 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 TTBK2Q6IQ55 1244 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 TYW1BQ6NUM6 668 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 LINC00301Q8NCQ3 95 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 BICD2Q8TD16 824 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 ZNF526Q8TF50 670 aaPredicted RBP27.61■■■□□ 2.01
RCCD1-203ENST00000555155 DCPSQ96C86 337 aaKnown RBP27.61■■■□□ 2.01
RCCD1-203ENST00000555155 PIGSQ96S52 555 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 POLR3EQ9NVU0 708 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 ZNF543Q08ER8 600 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 SF3A1Q15459 793 aaKnown RBP27.61■■■□□ 2.01
RCCD1-203ENST00000555155 NPY5RQ15761 445 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 NOM1Q5C9Z4 860 aaKnown RBP27.61■■■□□ 2.01
RCCD1-203ENST00000555155 PPP4R3BQ5MIZ7 849 aa27.61■■■□□ 2.01
RCCD1-203ENST00000555155 ADM5C9JUS6 153 aa27.6■■■□□ 2.01
RCCD1-203ENST00000555155 EARS2Q5JPH6 523 aaKnown RBP27.6■■■□□ 2.01
RCCD1-203ENST00000555155 ATP2B1P20020 1258 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 SLC16A2P36021 539 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 NASPP49321 788 aaPredicted RBP27.59■■■□□ 2.01
RCCD1-203ENST00000555155 ZC3H15Q8WU90 426 aaKnown RBP27.59■■■□□ 2.01
RCCD1-203ENST00000555155 MKL1Q969V6 931 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 RRP36Q96EU6 259 aaKnown RBP27.59■■■□□ 2.01
RCCD1-203ENST00000555155 SYCE3A1L190 88 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 SLFN13Q68D06 897 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 PNMA8AQ86V59 439 aaPredicted RBP27.59■■■□□ 2.01
RCCD1-203ENST00000555155 BRMS1Q9HCU9 246 aa27.59■■■□□ 2.01
RCCD1-203ENST00000555155 TBC1D12O60347 775 aa27.58■■■□□ 2.01
RCCD1-203ENST00000555155 TOB1P50616 345 aaPredicted RBP27.58■■■□□ 2.01
RCCD1-203ENST00000555155 MAP3K10Q02779 954 aa27.58■■■□□ 2.01
RCCD1-203ENST00000555155 SULF1Q8IWU6 871 aa27.58■■■□□ 2.01
RCCD1-203ENST00000555155 SYAP1Q96A49 352 aaPredicted RBP27.58■■■□□ 2.01
RCCD1-203ENST00000555155 NMRK2Q9NPI5 230 aa27.58■■■□□ 2.01
RCCD1-203ENST00000555155 SEC63Q9UGP8 760 aaKnown RBP27.58■■■□□ 2.01
RCCD1-203ENST00000555155 ZBTB21Q9ULJ3 1066 aa27.58■■■□□ 2.01
RCCD1-203ENST00000555155 STXBP3O00186 592 aa27.57■■■□□ 2
RCCD1-203ENST00000555155 SPTLC2O15270 562 aa27.57■■■□□ 2
RCCD1-203ENST00000555155 YEATS4O95619 227 aa27.57■■■□□ 2
RCCD1-203ENST00000555155 KRT26Q7Z3Y9 468 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms