RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TTLL1O95922 423 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 GRIN1Q05586 938 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 HLA-DOAP06340 250 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 PTPREP23469 700 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
TDP1-210ENST00000554976 CXCL9Q07325 125 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 R3HDM1Q15032 1099 aaKnown RBP10.25□□□□□ -0.77
TDP1-210ENST00000554976 STK38Q15208 465 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 FKBP1CQ5VVH2 108 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 CCDC17Q96LX7 622 aa10.25□□□□□ -0.77
TDP1-210ENST00000554976 ZNF70Q9UC06 446 aaPredicted RBP10.25□□□□□ -0.77
TDP1-210ENST00000554976 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 CUTAO60888 179 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 RAD17O75943 681 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 PFKFB1P16118 471 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 ME1P48163 572 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 FOXP4Q8IVH2 680 aaPredicted RBP10.24□□□□□ -0.77
TDP1-210ENST00000554976 ELOA2Q8IYF1 753 aaPredicted RBP10.24□□□□□ -0.77
TDP1-210ENST00000554976 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 ZNF579Q8NAF0 562 aaKnown RBP10.24□□□□□ -0.77
TDP1-210ENST00000554976 ZMYND12Q9H0C1 365 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 PCDHA4Q9UN74 947 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 STX8Q9UNK0 236 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 PARP1P09874 1014 aaKnown RBP10.24□□□□□ -0.77
TDP1-210ENST00000554976 GOLGA8HP0CJ92 632 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 POLD1P28340 1107 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 CAMK4Q16566 473 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 ASPRV1Q53RT3 343 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 GPKOWQ92917 476 aaPredicted RBP eCLIP10.24□□□□□ -0.772e-6■■■□□ 15.9
TDP1-210ENST00000554976 TIGD1Q96MW7 591 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 NYAP2Q9P242 653 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 PCDHA6Q9UN73 950 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
TDP1-210ENST00000554976 PCDHA8Q9Y5H6 950 aa10.24□□□□□ -0.77
TDP1-210ENST00000554976 A0A1B0GVL5 298 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 TYRO3Q06418 890 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 TCP10Q12799 353 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 UVSSAQ2YD98 709 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 TNMDQ9H2S6 317 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 SRPRBQ9Y5M8 271 aaKnown RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 OTOFQ9HC10 1997 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 RLFQ13129 1914 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 ESYT2A0FGR8 921 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 FZD9O00144 591 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 AP5Z1O43299 807 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 EDIL3O43854 480 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 XBP1P17861 261 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
TDP1-210ENST00000554976 NIM1KQ8IY84 436 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 FAM151AQ8WW52 585 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 CLIC6Q96NY7 704 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 TAOK3Q9H2K8 898 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 CPVLQ9H3G5 476 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 SYNPO2Q9UMS6 1093 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 CTAGE5O15320 804 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 TBC1D12O60347 775 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 MARCKSP29966 332 aaPredicted RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 TRAPPC10P48553 1259 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 MMP14P50281 582 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 ATP2C1P98194 919 aaPredicted RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 IL17AQ16552 155 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 BLIDQ8IZY5 108 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 LRRC47Q8N1G4 583 aaKnown RBP10.23□□□□□ -0.77
TDP1-210ENST00000554976 GMCL1P1Q8NEA9 526 aa10.23□□□□□ -0.77
TDP1-210ENST00000554976 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
TDP1-210ENST00000554976 GOLGA6L4A6NEF3 574 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
TDP1-210ENST00000554976 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 FAM83AQ86UY5 434 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
TDP1-210ENST00000554976 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 JMJD4Q9H9V9 463 aa10.22□□□□□ -0.77
TDP1-210ENST00000554976 ZNF202O95125 648 aa10.21□□□□□ -0.77
TDP1-210ENST00000554976 EEF2P13639 858 aaKnown RBP10.21□□□□□ -0.77
TDP1-210ENST00000554976 KCNA4P22459 653 aa10.21□□□□□ -0.77
TDP1-210ENST00000554976 RBM5P52756 815 aaKnown RBP eCLIP10.21□□□□□ -0.77
TDP1-210ENST00000554976 CERKLQ49MI3 558 aaPredicted RBP10.21□□□□□ -0.77
TDP1-210ENST00000554976 TMEM179Q6ZVK1 233 aa10.21□□□□□ -0.77
TDP1-210ENST00000554976 PIGSQ96S52 555 aa10.21□□□□□ -0.77
TDP1-210ENST00000554976 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.77
TDP1-210ENST00000554976 HERC5Q9UII4 1024 aaKnown RBP10.21□□□□□ -0.77
TDP1-210ENST00000554976 TUBE1Q9UJT0 475 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms