RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
SRP54-205ENST00000554803 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
SRP54-205ENST00000554803 TCF20Q9UGU0 1960 aaKnown RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 GOLGA6L4A6NEF3 574 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 ADCY5O95622 1261 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 IFIT1P09914 478 aaKnown RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 ATP5JP18859 108 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 CYP2B6P20813 491 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 C9orf50Q5SZB4 431 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 PROCA1Q8NCQ7 364 aaPredicted RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
SRP54-205ENST00000554803 NUP62CLQ9H1M0 184 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
SRP54-205ENST00000554803 MUC6Q6W4X9 2439 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 SLC27A2O14975 620 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 NEMFO60524 1076 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
SRP54-205ENST00000554803 CACNB2Q08289 660 aaPredicted RBP12.9□□□□□ -0.34
SRP54-205ENST00000554803 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRP54-205ENST00000554803 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
SRP54-205ENST00000554803 TTC39AQ5SRH9 613 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
SRP54-205ENST00000554803 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
SRP54-205ENST00000554803 IL25Q9H293 177 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 PRKAG2Q9UGJ0 569 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 DAGLAQ9Y4D2 1042 aa12.9□□□□□ -0.34
SRP54-205ENST00000554803 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 FIBPO43427 364 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 CTNND1O60716 968 aaKnown RBP12.89□□□□□ -0.35
SRP54-205ENST00000554803 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
SRP54-205ENST00000554803 CCND3P30281 292 aaPredicted RBP12.89□□□□□ -0.35
SRP54-205ENST00000554803 CDC25BP30305 580 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 MCAMP43121 646 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 SYCP1Q15431 976 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 CCDC158Q5M9N0 1113 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
SRP54-205ENST00000554803 FSD1Q9BTV5 496 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 SENP6Q9GZR1 1112 aaPredicted RBP12.89□□□□□ -0.35
SRP54-205ENST00000554803 MORF4L1Q9UBU8 362 aa12.89□□□□□ -0.35
SRP54-205ENST00000554803 TCHHQ07283 1943 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 PTH1RQ03431 593 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
SRP54-205ENST00000554803 PABPC4Q13310 644 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRP54-205ENST00000554803 ME3Q16798 604 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 SOCS4Q8WXH5 440 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 HAUS7Q99871 368 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
SRP54-205ENST00000554803 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
SRP54-205ENST00000554803 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 ZAP70P43403 619 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 RTP1P59025 263 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 DNM1Q05193 864 aaKnown RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 RASGRF1Q13972 1273 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 DNTTIP2Q5QJE6 756 aaKnown RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 NAA16Q6N069 864 aaPredicted RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRP54-205ENST00000554803 ATXN2LQ8WWM7 1075 aaKnown RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 ASCC2Q9H1I8 757 aaPredicted RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 GNL3LQ9NVN8 582 aaKnown RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
SRP54-205ENST00000554803 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
SRP54-205ENST00000554803 ZBTB22O15209 634 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
SRP54-205ENST00000554803 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 KIAA1524Q8TCG1 905 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 USP6NLQ92738 828 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 GTF3C6Q969F1 213 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
SRP54-205ENST00000554803 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
SRP54-205ENST00000554803 CHD9Q3L8U1 2897 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 GOLIM4O00461 696 aa12.85□□□□□ -0.35
SRP54-205ENST00000554803 ENTPD3O75355 529 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 259.7 ms