RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 E7EWF7 191 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 FKTNO75072 461 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 REC8O95072 547 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 OSBPP22059 807 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 HERVK_113P62684 666 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 CAP1Q01518 475 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 RCSD1Q6JBY9 416 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 POTEEQ6S8J3 1075 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 CATSPERGQ6ZRH7 1159 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 RASGRP2Q7LDG7 609 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
CNIH1-204ENST00000554683 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
CNIH1-204ENST00000554683 BRCA2P51587 3418 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
CNIH1-204ENST00000554683 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
CNIH1-204ENST00000554683 F5H6K3 240 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
CNIH1-204ENST00000554683 PSEN1P49768 467 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 KLRC3Q07444 240 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
CNIH1-204ENST00000554683 FAM110CQ1W6H9 321 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
CNIH1-204ENST00000554683 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
CNIH1-204ENST00000554683 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 TNKSO95271 1327 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 MYPNQ86TC9 1320 aa12.61□□□□□ -0.39
CNIH1-204ENST00000554683 TOP1P11387 765 aaKnown RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 TIE1P35590 1138 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 ANTXR2P58335 489 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 LACTBP83111 547 aaPredicted RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 SP3Q02447 781 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 TRDNQ13061 729 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 CD99L2Q8TCZ2 262 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 GMCL1Q96IK5 515 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 ZSCAN10Q96SZ4 725 aaPredicted RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 TMEM47Q9BQJ4 181 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
CNIH1-204ENST00000554683 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
CNIH1-204ENST00000554683 MYH6P13533 1939 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 EPB41L2O43491 1005 aaKnown RBP12.59□□□□□ -0.39
CNIH1-204ENST00000554683 RAD21O60216 631 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 CNMDO75829 334 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 FLOT1O75955 427 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 CTGFP29279 349 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 HSPA4P34932 840 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 SEC23AQ15436 765 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 RNF20Q5VTR2 975 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 DGKHQ86XP1 1220 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 ANKS1AQ92625 1134 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 KCNB2Q92953 911 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 ERO1AQ96HE7 468 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 TTC14Q96N46 770 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 FBXO28Q9NVF7 368 aa12.59□□□□□ -0.39
CNIH1-204ENST00000554683 PEX10O60683 326 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 PDHBP11177 359 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 ERVK-24P63145 666 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
CNIH1-204ENST00000554683 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 PPP1R9AQ9ULJ8 1098 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
CNIH1-204ENST00000554683 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 BMP3P12645 472 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 SLC1A4P43007 532 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 COG2Q14746 738 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 C8orf34Q49A92 452 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
CNIH1-204ENST00000554683 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 BTBD7Q9P203 1132 aa12.57□□□□□ -0.4
CNIH1-204ENST00000554683 RBPJLQ9UBG7 517 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms