RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PDIA5Q14554 519 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PPP4R3BQ5MIZ7 849 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 BEND6Q5SZJ8 279 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF658Q5TYW1 1059 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 GPR161Q8N6U8 529 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 SMARCC1Q92922 1105 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 NAT10Q9H0A0 1025 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 DENND2AQ9ULE3 1009 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ASAP1Q9ULH1 1129 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ADGRG1Q9Y653 693 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 NFASCO94856 1347 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 HAX1O00165 279 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PIK3CDO00329 1044 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PLSCR1O15162 318 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 MAPK13O15264 365 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 RPS6KA4O75676 772 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 GYPCP04921 128 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 CYP3A4P08684 503 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 MSNP26038 577 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 EEF1GP26641 437 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PHKA1P46020 1223 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 JAM2P57087 298 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 SKOR1P84550 965 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PPARAQ07869 468 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 BRD3Q15059 726 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 JAKMIP3Q5VZ66 844 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 DNAJC10Q8IXB1 793 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 SAMD3Q8N6K7 520 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC155Q8N6L0 562 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 XPO4Q9C0E2 1151 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 DNAJC25Q9H1X3 360 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC69A6NI79 296 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 GOLIM4O00461 696 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ADAMTS3O15072 1205 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 MTA2O94776 668 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 STARD3NLO95772 234 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 PAEPP09466 180 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 GUCY1A2P33402 732 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 CEP57L1Q8IYX8 460 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 LCORLQ8N3X6 602 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 RASGEF1CQ8N431 466 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 FANCBQ8NB91 859 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 AENQ8WTP8 325 aaKnown RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ZSCAN10Q96SZ4 725 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 TTC12Q9H892 705 aaPredicted RBP3.95□□□□□ -1.78
SEC23A-207ENST00000554615 L1RE1Q9UN81 338 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 ZBTB1Q9Y2K1 713 aa3.95□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC151A5D8V7 595 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SASH3O75995 380 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PRR29P0C7W0 189 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CIITAP33076 1130 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 ERVK-24P63145 666 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 HDLBPQ00341 1268 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 POU5F1Q01860 360 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 POSTNQ15063 836 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CEP135Q66GS9 1140 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 LRRC55Q6ZSA7 311 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 C3orf67Q6ZVT6 689 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC186Q7Z3E2 898 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 EFCAB13Q8IY85 973 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 C3orf20Q8ND61 904 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 BAP1Q92560 729 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 EIF3CQ99613 913 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 FTOQ9C0B1 505 aaKnown RBP eCLIP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 VPS33BQ9H267 617 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 RNF41Q9H4P4 317 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 GDPD2Q9HCC8 539 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 ABCB6Q9NP58 842 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 KCNMB3Q9NPA1 279 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 BARHL2Q9NY43 387 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CLIP2Q9UDT6 1046 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 MINPP1Q9UNW1 487 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 LEMD3Q9Y2U8 911 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 NCANO14594 1321 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 A0A0A6YYK5 440 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PVALEFA0A1B0GWK0 134 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 IRS4O14654 1257 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 SLU7O95391 586 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CRKLP46109 303 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 TIMM10P62072 90 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 Q4G0T1 1027 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 HGSNATQ68CP4 663 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CC2D1AQ6P1N0 951 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 TATDN1Q6P1N9 297 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 FBXO38Q6PIJ6 1188 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 DDX46Q7L014 1031 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC170Q8IYT3 715 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 TTC5Q8N0Z6 440 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 MTMR14Q8NCE2 650 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 DHTKD1Q96HY7 919 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 RPGRIP1Q96KN7 1286 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 CRAMP1Q96RY5 1269 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHA6Q9UN73 950 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHA8Q9Y5H6 950 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 V9GYY5 206 aaPredicted RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 GTPBP10A4D1E9 387 aaKnown RBP3.94□□□□□ -1.78
SEC23A-207ENST00000554615 GFPT2O94808 682 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 ECHS1P30084 290 aa3.94□□□□□ -1.78
SEC23A-207ENST00000554615 PRKCIP41743 596 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms