RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ATG4CQ96DT6 458 aa15.48■□□□□ 0.07
SHMT2-211ENST00000554310 RAD50Q92878 1312 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 BRCA2P51587 3418 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 F5H6K3 240 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 MYCP01106 439 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-211ENST00000554310 CCL5P13501 91 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 RGS2P41220 211 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 KLRC3Q07444 240 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 MTFR1Q15390 333 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
SHMT2-211ENST00000554310 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 APBA2Q99767 749 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 SPATC1LQ9H0A9 340 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 CLIP2Q9UDT6 1046 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 IVNS1ABPQ9Y6Y0 642 aa15.47■□□□□ 0.07
SHMT2-211ENST00000554310 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-211ENST00000554310 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
SHMT2-211ENST00000554310 GJB1P08034 283 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 NT5C2P49902 561 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 MORN1Q5T089 497 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 WDR78Q5VTH9 848 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 LRRC47Q8N1G4 583 aaKnown RBP15.46■□□□□ 0.07
SHMT2-211ENST00000554310 USP6NLQ92738 828 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 SLF1Q9BQI6 1058 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 MOV10L1Q9BXT6 1211 aaKnown RBP15.46■□□□□ 0.07
SHMT2-211ENST00000554310 RNF41Q9H4P4 317 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-211ENST00000554310 ADAMTS5Q9UNA0 930 aa15.46■□□□□ 0.07
SHMT2-211ENST00000554310 SLC15A5A6NIM6 579 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 EN2P19622 333 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-211ENST00000554310 CYP2B6P20813 491 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 MAP2K5Q13163 448 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 GRB14Q14449 540 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-211ENST00000554310 STAG1Q8WVM7 1258 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 TRIB2Q92519 343 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 NUP88Q99567 741 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-211ENST00000554310 RNF208Q9H0X6 261 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 MROH8Q9H579 483 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 FBXO28Q9NVF7 368 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 STX8Q9UNK0 236 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 TACC3Q9Y6A5 838 aa15.45■□□□□ 0.06
SHMT2-211ENST00000554310 VWA5AO00534 786 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 ZKSCAN1P17029 563 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-211ENST00000554310 CAPN2P17655 700 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 PTPREP23469 700 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 COPB2P35606 906 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 GJA8P48165 433 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 HAND2P61296 217 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 PLS1Q14651 629 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-211ENST00000554310 TBC1D10CQ8IV04 446 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 RUFY2Q8WXA3 655 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 NBPF3Q9H094 633 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 UNC93B1Q9H1C4 597 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 INCENPQ9NQS7 918 aa15.44■□□□□ 0.06
SHMT2-211ENST00000554310 PAK6Q9NQU5 681 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-211ENST00000554310 ZNF213O14771 459 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 STRNO43815 780 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 SLC25A27O95847 323 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 HOXC6P09630 235 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 ERCC3P19447 782 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 NOVP48745 357 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 TMEM132BQ14DG7 1078 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 RRP12Q5JTH9 1297 aaKnown RBP15.43■□□□□ 0.06
SHMT2-211ENST00000554310 SLFN13Q68D06 897 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 MFSD6Q6ZSS7 791 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 PRPF38AQ8NAV1 312 aaKnown RBP15.43■□□□□ 0.06
SHMT2-211ENST00000554310 SHISA4Q96DD7 197 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.43■□□□□ 0.066e-7■□□□□ 9.5
SHMT2-211ENST00000554310 IL17RBQ9NRM6 502 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 CTNNA3Q9UI47 895 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 FEM1BQ9UK73 627 aa15.43■□□□□ 0.06
SHMT2-211ENST00000554310 ZNF214Q9UL59 606 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-211ENST00000554310 NMT2O60551 498 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 BMP3P12645 472 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 CHMLP26374 656 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 MAP3K21Q5TCX8 1036 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 NCAPG2Q86XI2 1143 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 RIOX2Q8IUF8 465 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 ABRAQ8N0Z2 381 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 U2AF1L4Q8WU68 220 aaKnown RBP15.42■□□□□ 0.06
SHMT2-211ENST00000554310 TEX13BQ9BXU2 312 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 TCP11L1Q9NUJ3 509 aa15.42■□□□□ 0.06
SHMT2-211ENST00000554310 RBM19Q9Y4C8 960 aaKnown RBP15.42■□□□□ 0.06
SHMT2-211ENST00000554310 SLC34A2O95436 690 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
SHMT2-211ENST00000554310 ADORA2AP29274 412 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 STAT3P40763 770 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 SLC1A4P43007 532 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 STAT2P52630 851 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 IMMTQ16891 758 aaKnown RBP15.41■□□□□ 0.06
SHMT2-211ENST00000554310 ESR2Q92731 530 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 IL25Q9H293 177 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms