RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 IFIT3O14879 490 aaKnown RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 NMT2O60551 498 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 PLA2G6O60733 806 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 FLOT1O75955 427 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 GNRH1P01148 92 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 CYP2C8P10632 490 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 BMP3P12645 472 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 SLC1A4P43007 532 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 GPATCH4Q5T3I0 446 aaKnown RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 SPICE1Q8N0Z3 855 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
IFT43-206ENST00000554026 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
IFT43-206ENST00000554026 STAT2P52630 851 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 ANAPC15P60006 121 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 CCNA1P78396 465 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 WTAPQ15007 396 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 TMEM67Q5HYA8 995 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 STOX1Q6ZVD7 989 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 CYB5R4Q7L1T6 521 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 DHX32Q7L7V1 743 aaKnown RBP13.21□□□□□ -0.29
IFT43-206ENST00000554026 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
IFT43-206ENST00000554026 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
IFT43-206ENST00000554026 PRC1O43663 620 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 BCRP11274 1271 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 DSG3P32926 999 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 LIFRP42702 1097 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 SEC23AQ15436 765 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 ZNF296Q8WUU4 475 aaPredicted RBP13.2□□□□□ -0.3
IFT43-206ENST00000554026 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
IFT43-206ENST00000554026 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
IFT43-206ENST00000554026 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
IFT43-206ENST00000554026 SPDYE16A6NNV3 312 aaPredicted RBP13.19□□□□□ -0.3
IFT43-206ENST00000554026 SNHG28P0DPA3 235 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 HOXD10P28358 340 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 COPB2P35606 906 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 PRMT2P55345 433 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
IFT43-206ENST00000554026 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
IFT43-206ENST00000554026 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 ASPRV1Q53RT3 343 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
IFT43-206ENST00000554026 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 TM6SF1Q9BZW5 370 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
IFT43-206ENST00000554026 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
IFT43-206ENST00000554026 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 ZBED4O75132 1171 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 CALM1P0DP23 149 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 CALM2P0DP24 149 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 CALM3P0DP25 149 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 PDHBP11177 359 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 OAZ1P54368 228 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 FCGRTP55899 365 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 SOX10P56693 466 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 ERVK-24P63145 666 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
IFT43-206ENST00000554026 FGD1P98174 961 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
IFT43-206ENST00000554026 R3HDMLQ9H3Y0 253 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 ADAMTS5Q9UNA0 930 aa13.18□□□□□ -0.3
IFT43-206ENST00000554026 DDAH1O94760 285 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
IFT43-206ENST00000554026 MAPK4P31152 587 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 KIF5BP33176 963 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 ANTXR2P58335 489 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
IFT43-206ENST00000554026 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 CTU1Q7Z7A3 348 aaKnown RBP13.17□□□□□ -0.3
IFT43-206ENST00000554026 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 IL27Q8NEV9 243 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
IFT43-206ENST00000554026 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
IFT43-206ENST00000554026 VWA5AO00534 786 aa13.16□□□□□ -0.3
IFT43-206ENST00000554026 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms