RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CDR1P51861 262 aa4.73□□□□□ -1.65
SRP54-204ENST00000553923 YARSP54577 528 aaKnown RBP4.73□□□□□ -1.65
SRP54-204ENST00000553923 VMACQ2NL98 169 aa4.73□□□□□ -1.65
SRP54-204ENST00000553923 BNC2Q6ZN30 1099 aaPredicted RBP4.73□□□□□ -1.65
SRP54-204ENST00000553923 RNF111Q6ZNA4 994 aa4.73□□□□□ -1.65
SRP54-204ENST00000553923 SYTL5Q8TDW5 730 aaPredicted RBP4.73□□□□□ -1.65
SRP54-204ENST00000553923 CELA3BP08861 270 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 PNLIPP16233 465 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 ERVFRD-1P60508 538 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 FAM129CQ86XR2 697 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 IGDCC3Q8IVU1 814 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 TP53I13Q8NBR0 393 aaPredicted RBP4.72□□□□□ -1.65
SRP54-204ENST00000553923 SYT8Q8NBV8 401 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 MAP6Q96JE9 813 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 HHIPL1Q96JK4 782 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 CCDC74BQ96LY2 380 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 PLCD4Q9BRC7 762 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 NOC4LQ9BVI4 516 aaKnown RBP4.72□□□□□ -1.65
SRP54-204ENST00000553923 SIRT5Q9NXA8 310 aa4.72□□□□□ -1.65
SRP54-204ENST00000553923 POLR3KQ9Y2Y1 108 aaPredicted RBP4.72□□□□□ -1.65
SRP54-204ENST00000553923 ADRB1P08588 477 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 RLBP1P12271 317 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 RPL10P27635 214 aaKnown RBP4.71□□□□□ -1.66
SRP54-204ENST00000553923 CEBPAP49715 358 aaPredicted RBP4.71□□□□□ -1.66
SRP54-204ENST00000553923 EFEMP1Q12805 493 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 MZB1Q8WU39 189 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 GATAD2BQ8WXI9 593 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 KLHL14Q9P2G3 628 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 REV1Q9UBZ9 1251 aa4.71□□□□□ -1.66
SRP54-204ENST00000553923 F13A1P00488 732 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 SDHBP21912 280 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 ST13P50502 369 aaKnown RBP4.7□□□□□ -1.66
SRP54-204ENST00000553923 NMIQ13287 307 aaPredicted RBP4.7□□□□□ -1.66
SRP54-204ENST00000553923 CAMK2GQ13555 558 aaPredicted RBP4.7□□□□□ -1.66
SRP54-204ENST00000553923 KIR3DS1Q14943 382 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 CLEC16AQ2KHT3 1053 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 BBS9Q3SYG4 887 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 ZPBP2Q6X784 338 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 CEP128Q6ZU80 1094 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 WAPLQ7Z5K2 1190 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 ZDHHC14Q8IZN3 488 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 LINC00116Q8NCU8 138 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 TCTN2Q96GX1 697 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 TEPSINQ96N21 525 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 KIF2CQ99661 725 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 DUSP9Q99956 384 aaKnown RBP4.7□□□□□ -1.66
SRP54-204ENST00000553923 FOXP3Q9BZS1 431 aa4.7□□□□□ -1.66
SRP54-204ENST00000553923 LUC7LQ9NQ29 371 aaKnown RBP4.7□□□□□ -1.66
SRP54-204ENST00000553923 USP31Q70CQ4 1352 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 HTR3BO95264 441 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 PF4P02776 101 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 CTSHP09668 335 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 TNNI2P48788 182 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 LMNB2Q03252 620 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 TMC3Q7Z5M5 1100 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 LDHDQ86WU2 507 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 SP8Q8IXZ3 490 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 ZNF655Q8N720 491 aaPredicted RBP4.69□□□□□ -1.66
SRP54-204ENST00000553923 LINC01356Q8N9X3 169 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 RHOVQ96L33 236 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 ARID3AQ99856 593 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 ADAM7Q9H2U9 754 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 ZMYM5Q9UJ78 669 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 TCFL5Q9UL49 500 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 PCDHA5Q9Y5H7 936 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 IVNS1ABPQ9Y6Y0 642 aa4.69□□□□□ -1.66
SRP54-204ENST00000553923 FADS2P1A8MWK0 482 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 ABLIM1O14639 778 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 RGS13O14921 159 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 UBOX5O94941 541 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 CAP1Q01518 475 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 TAF1CQ15572 869 aaPredicted RBP4.68□□□□□ -1.66
SRP54-204ENST00000553923 SLC14A2Q15849 920 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 FRMD5Q7Z6J6 570 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 KLHL3Q9UH77 587 aa4.68□□□□□ -1.66
SRP54-204ENST00000553923 ZC3H12DA2A288 527 aaKnown RBP4.67□□□□□ -1.66
SRP54-204ENST00000553923 F6X3S4 739 aa4.67□□□□□ -1.66
SRP54-204ENST00000553923 GRIN3BO60391 1043 aa4.67□□□□□ -1.66
SRP54-204ENST00000553923 RTP1P59025 263 aa4.67□□□□□ -1.66
SRP54-204ENST00000553923 SNW1Q13573 536 aaKnown RBP4.67□□□□□ -1.66
SRP54-204ENST00000553923 CBX2Q14781 532 aaPredicted RBP4.67□□□□□ -1.66
SRP54-204ENST00000553923 NBPF9Q3BBW0 867 aa4.67□□□□□ -1.66
SRP54-204ENST00000553923 HSF5Q4G112 596 aaPredicted RBP4.67□□□□□ -1.66
SRP54-204ENST00000553923 IRS2Q9Y4H2 1338 aa4.67□□□□□ -1.66
SRP54-204ENST00000553923 FFAR3O14843 346 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 PRICKLE3O43900 615 aaPredicted RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 BPNT1O95861 308 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 GARTP22102 1010 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 IGFBP6P24592 240 aaPredicted RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 GBP1P32455 592 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 PCBP3P57721 371 aaKnown RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 ZXDCQ2QGD7 858 aaPredicted RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 SPATS1Q496A3 300 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 NBPF12Q5TAG4 269 aaPredicted RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 PHACTR4Q8IZ21 702 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 PWWP2AQ96N64 755 aa4.66□□□□□ -1.66
SRP54-204ENST00000553923 ASCC2Q9H1I8 757 aaPredicted RBP4.66□□□□□ -1.66
SRP54-204ENST00000553923 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms