RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 ITGB2P05107 769 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 ZNF865P0CJ78 1059 aaPredicted RBP5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 ANKRD39Q53RE8 183 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 SDE2Q6IQ49 451 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 POMZP3Q6PJE2 187 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 C22orf34Q6ZV56 151 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 SPATC1Q76KD6 591 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 SHISA5Q8N114 240 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 FAM181AQ8N9Y4 354 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 LRRN4CLQ8ND94 238 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 PIWIL2Q8TC59 973 aaKnown RBP5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 BRF1Q92994 677 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 HEXIM2Q96MH2 286 aaKnown RBP5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 PRDM14Q9GZV8 571 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 GFOD1Q9NXC2 390 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 ZMYM5Q9UJ78 669 aa5.33□□□□□ -1.56
EFCAB11-204ENST00000553871 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 MEIS1O00470 390 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 CYP26A1O43174 497 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 DIAPH1O60610 1272 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 CLSTN1O94985 981 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 PROCP04070 461 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 CEACAM5P06731 702 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 NMIQ13287 307 aaPredicted RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 SNW1Q13573 536 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 PPP2R5DQ14738 602 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 FIBCD1Q8N539 461 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 THAP3Q8WTV1 239 aaPredicted RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 VWCEQ96DN2 955 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 IPO9Q96P70 1041 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 TRIT1Q9H3H1 467 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 NOL6Q9H6R4 1146 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 GPATCH2Q9NW75 528 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 APEX2Q9UBZ4 518 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 AKT3Q9Y243 479 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 SF3B6Q9Y3B4 125 aaKnown RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 TBX22Q9Y458 520 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 FHOD1Q9Y613 1164 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 CAPN6Q9Y6Q1 641 aa5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 COL17A1Q9UMD9 1497 aaPredicted RBP5.32□□□□□ -1.56
EFCAB11-204ENST00000553871 CNTNAP4Q9C0A0 1308 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SHOXO15266 292 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SIGLEC6O43699 453 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 DYRK3O43781 588 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 CANXP27824 592 aaKnown RBP5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 ZNF445P59923 1031 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 TNK2Q07912 1038 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 RSPO4Q2I0M5 234 aaPredicted RBP5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 C2orf27AQ580R0 203 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 CDKAL1Q5VV42 579 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 CWF19L1Q69YN2 538 aaKnown RBP5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 FAM214BQ7L5A3 538 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 TMC3Q7Z5M5 1100 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SLC51AQ86UW1 340 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 ZNF227Q86WZ6 799 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 BVESQ8NE79 360 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 Q96M66 194 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SPATA9Q9BWV2 254 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 MKNK2Q9HBH9 465 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 CHST7Q9NS84 486 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 PRR13Q9NZ81 148 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 PIM2Q9P1W9 311 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 SUSD2Q9UGT4 822 aa5.31□□□□□ -1.56
EFCAB11-204ENST00000553871 A0A087WZG4 1122 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 CDC45O75419 566 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 KCNH1O95259 989 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 IGHA1P01876 353 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 ITGAVP06756 1048 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 CLCN7P51798 805 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 OXCT1P55809 520 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 HSP90AA2PQ14568 343 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 HOMER1Q86YM7 354 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 FAM177A1Q8N128 213 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 LILRB2Q8N423 598 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 ZSWIM2Q8NEG5 633 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 SYTL5Q8TDW5 730 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 APPBP2Q92624 585 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 RNPC3Q96LT9 517 aaKnown RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 CDC6Q99741 560 aa5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 AARSD1Q9BTE6 412 aaKnown RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 CGGBP1Q9UFW8 167 aaPredicted RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 DIS3Q9Y2L1 958 aaKnown RBP5.3□□□□□ -1.56
EFCAB11-204ENST00000553871 TMEM265A0A087WTH1 108 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 TRAV20A0A0B4J274 112 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 SSU72P8A0A1W2PR75 194 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 H3BS24 57 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 IFI16Q16666 785 aaKnown RBP5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 TAF7LQ5H9L4 462 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 ZDHHC13Q8IUH4 622 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 NETO1Q8TDF5 533 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 RCC1LQ96I51 464 aaKnown RBP5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 SLC26A8Q96RN1 970 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 FANCLQ9NW38 375 aa5.29□□□□□ -1.56
EFCAB11-204ENST00000553871 PTCH2Q9Y6C5 1203 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms