RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 GRIN3BO60391 1043 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 PEX10O60683 326 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 HTR3BO95264 441 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 PI3P19957 117 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 EGR3Q06889 387 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 MLECQ14165 292 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 FBXL19Q6PCT2 694 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 REC114Q7Z4M0 266 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 ZDHHC14Q8IZN3 488 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 PDZD8Q8NEN9 1154 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 CXorf38Q8TB03 319 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 ZNF552Q9H707 407 aaPredicted RBP5.51□□□□□ -1.53
LINC00648-201ENST00000553747 REV1Q9UBZ9 1251 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 KLHL3Q9UH77 587 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 DUSP13Q9UII6 198 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 CEP131Q9UPN4 1083 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 ROBO2Q9HCK4 1378 aa5.51□□□□□ -1.53
LINC00648-201ENST00000553747 PRR36Q9H6K5 1346 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 GARTP22102 1010 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 TNNI2P48788 182 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 SIRT2Q8IXJ6 389 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 SLFN12Q8IYM2 578 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
LINC00648-201ENST00000553747 TMPRSS5Q9H3S3 457 aa5.5□□□□□ -1.53
LINC00648-201ENST00000553747 YBX2Q9Y2T7 364 aaKnown RBP5.5□□□□□ -1.53
LINC00648-201ENST00000553747 POLR3KQ9Y2Y1 108 aaPredicted RBP5.5□□□□□ -1.53
LINC00648-201ENST00000553747 RFXAPO00287 272 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 SASH1O94885 1247 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 CELA3BP08861 270 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 GAB4Q2WGN9 574 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 PHACTR4Q8IZ21 702 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 LILRA2Q8N149 483 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 PIWIL2Q8TC59 973 aaKnown RBP5.49□□□□□ -1.53
LINC00648-201ENST00000553747 CCDC74BQ96LY2 380 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 GPR160Q9UJ42 338 aa5.49□□□□□ -1.53
LINC00648-201ENST00000553747 CHURC1-FNTBB4DL54 471 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 PSPNO60542 156 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 GREM1O60565 184 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 ZNF76P36508 570 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 OXR1Q8N573 874 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 LRRC3Q9BY71 257 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 BACH2Q9BYV9 841 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 CWC22Q9HCG8 908 aaKnown RBP5.48□□□□□ -1.53
LINC00648-201ENST00000553747 BRMS1Q9HCU9 246 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 EBF1Q9UH73 591 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 KCNH3Q9ULD8 1083 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 PCDHB14Q9Y5E9 798 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 PCDHA11Q9Y5I1 949 aa5.48□□□□□ -1.53
LINC00648-201ENST00000553747 RBM47A0AV96 593 aaKnown RBP5.47□□□□□ -1.53
LINC00648-201ENST00000553747 FITM1A5D6W6 292 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 LTKP29376 864 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 GBP1P32455 592 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 TMEM151BQ8IW70 566 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 PPP1R13LQ8WUF5 828 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 ADAM7Q9H2U9 754 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 TRIT1Q9H3H1 467 aaKnown RBP5.47□□□□□ -1.53
LINC00648-201ENST00000553747 UBP1Q9NZI7 540 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 ADAMTS1Q9UHI8 967 aa5.47□□□□□ -1.53
LINC00648-201ENST00000553747 ADRB1P08588 477 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 MCM4P33991 863 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 AFF3P51826 1226 aaKnown RBP5.46□□□□□ -1.54
LINC00648-201ENST00000553747 EPHB3P54753 998 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 SEZ6Q53EL9 994 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 RNF141Q8WVD5 230 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 SHISA4Q96DD7 197 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 KIF2CQ99661 725 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 SPON2Q9BUD6 331 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 GPATCH2Q9NW75 528 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 IRAK3Q9Y616 596 aa5.46□□□□□ -1.54
LINC00648-201ENST00000553747 ATE1O95260 518 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 EFEMP2O95967 443 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 RAG1P15918 1043 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 CRKP46108 304 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 ZNF165P49910 485 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 SRSF3P84103 164 aaKnown RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 ARSHQ5FYA8 562 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 LDLRAD1Q5T700 205 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 TSPYL5Q86VY4 417 aaPredicted RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 KIAA0825Q8IV33 1275 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 DTWD2Q8NBA8 298 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 NKD1Q969G9 470 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 DACT3Q96B18 629 aaPredicted RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 SIGLEC10Q96LC7 697 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 KREMEN1Q96MU8 473 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 NT5C1AQ9BXI3 368 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 EPB41L4AQ9HCS5 686 aaPredicted RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 METTL5Q9NRN9 209 aaKnown RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 GMIPQ9P107 970 aa5.45□□□□□ -1.54
LINC00648-201ENST00000553747 MBD1Q9UIS9 605 aaPredicted RBP5.45□□□□□ -1.54
LINC00648-201ENST00000553747 SLC22A31A6NKX4 558 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 RGS13O14921 159 aa5.44□□□□□ -1.54
LINC00648-201ENST00000553747 DNAJA2O60884 412 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms