RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 USP17L5A8MUK1 530 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 POLR2DO15514 142 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 MCM7P33993 719 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 CLCN1P35523 988 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 TTLL6Q8N841 843 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC148Q8NFR7 591 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 TIGD1Q96MW7 591 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 UBA5Q9GZZ9 404 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 SEC63Q9UGP8 760 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 ZKSCAN5Q9Y2L8 839 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 SHMT1P34896 483 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 NAPAP54920 295 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 IQCB1Q15051 598 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 KRBA2Q6ZNG9 492 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 SUPT20HQ8NEM7 779 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 TRIM34Q9BYJ4 488 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC194A0A1B0GVG4 234 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 VWA3AA6NCI4 1184 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 YDJCA8MPS7 323 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 FOXN1O15353 648 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 PDHBP11177 359 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 PTGDRQ13258 359 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 CC2D2BQ6DHV5 1058 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 RRP36Q96EU6 259 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 TDRD3Q9H7E2 651 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 C10orf71Q711Q0 1435 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 PLIN4Q96Q06 1357 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 DDTLA6NHG4 134 aaPredicted RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 STXBP3O00186 592 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 TTLL1O95922 423 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC93Q567U6 631 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 DHX40Q8IX18 779 aaKnown RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 EPSTI1Q96J88 318 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 PIGSQ96S52 555 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 TTC12Q9H892 705 aaPredicted RBP10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 BARHL2Q9NY43 387 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 SERTAD1Q9UHV2 236 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 SIPA1L1O43166 1804 aa10.38□□□□□ -0.75
RAB3IP-218ENST00000553099 FAM237AA0A1B0GTK4 181 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 RAD17O75943 681 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 BMP15O95972 392 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 DPEP1P16444 411 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 NLRP12P59046 1061 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 DHX58Q96C10 678 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 FAM198AQ9UFP1 575 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 FKBP1AP62942 108 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC96Q2M329 555 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 CFAP100Q494V2 611 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 GRAMD1CQ8IYS0 662 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 HOOK1Q9UJC3 728 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
RAB3IP-218ENST00000553099 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 ZBTB7AO95365 584 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 INF2Q27J81 1249 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 SOGA3Q5TF21 947 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 FERMT2Q96AC1 680 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 DHX36Q9H2U1 1008 aaKnown RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PPP1R1BQ9UD71 204 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PCDHA5Q9Y5H7 936 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PSME4Q14997 1843 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 TRAPPC10P48553 1259 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 ZNF75DP51815 510 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 POSTNQ15063 836 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 PI4KBQ9UBF8 816 aa10.36□□□□□ -0.75
RAB3IP-218ENST00000553099 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 SMCO2A6NFE2 343 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 GDF11O95390 407 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 AFMP43652 599 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 ASPRV1Q53RT3 343 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 RTKN2Q8IZC4 609 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 PRMT6Q96LA8 375 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 IDI2Q9BXS1 227 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 EHD4Q9H223 541 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms