RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PDILTQ8N807 584 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 EPSTI1Q96J88 318 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 BARHL2Q9NY43 387 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 H0YIN7 160 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 M0R2N6 131 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 STXBP3O00186 592 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 GOLGA8HP0CJ92 632 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 SMARCA1P28370 1054 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 SARSP49591 514 aaKnown RBP16■□□□□ 0.15
RAB3IP-216ENST00000552199 MAN1B1Q9UKM7 699 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 MYH8P13535 1937 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 BMP6P22004 513 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 CDC42EP5Q6NZY7 148 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 SYMPKQ92797 1274 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 TEKT1Q969V4 418 aa15.99■□□□□ 0.15
RAB3IP-216ENST00000552199 SLX4Q8IY92 1834 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 A0A087X0B3 334 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 MCM7P33993 719 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 MYL5Q02045 173 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 LRMPQ12912 555 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 SWAP70Q9UH65 585 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 IGKV6D-41A0A0C4DH26 115 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 VWA3AA6NCI4 1184 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 SLFN14P0C7P3 912 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 TERF1P54274 439 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 RASGRP2Q7LDG7 609 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 GRAMD1CQ8IYS0 662 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 TRIML1Q8N9V2 468 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 CACTINQ8WUQ7 758 aaKnown RBP15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 DHX58Q96C10 678 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 CCDC34Q96HJ3 373 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 OSBPL5Q9H0X9 879 aaPredicted RBP15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 HSD3B7Q9H2F3 369 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 MTMR4Q9NYA4 1195 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 R3HCC1Q9Y3T6 440 aaKnown RBP15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
RAB3IP-216ENST00000552199 CRKP46108 304 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 FKBP1AP62942 108 aaKnown RBP15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 MORC3Q14149 939 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 ARL6IP4Q66PJ3 421 aaKnown RBP15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 SH3RF1Q7Z6J0 888 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 CPVLQ9H3G5 476 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 SERPINB13Q9UIV8 391 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 MYO3BQ8WXR4 1341 aa15.97■□□□□ 0.15
RAB3IP-216ENST00000552199 CCDC194A0A1B0GVG4 234 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 USP17L5A8MUK1 530 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 NEMFO60524 1076 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 AKR1B1P15121 316 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 SLC15A2Q16348 729 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 IL17AQ16552 155 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 STRIP1Q5VSL9 837 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 MLKLQ8NB16 471 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 RRP36Q96EU6 259 aaKnown RBP15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 ZDHHC15Q96MV8 337 aa15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
RAB3IP-216ENST00000552199 MYO1BO43795 1136 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 SMC2O95347 1197 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 FANCCQ00597 558 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 LRRC8AQ8IWT6 810 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 CNKSR1Q969H4 720 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 PAGE5Q96GU1 130 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 IMPACTQ9P2X3 320 aa15.96■□□□□ 0.14
RAB3IP-216ENST00000552199 PDHBP11177 359 aa15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 CHRNA5P30532 468 aa15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 NAPAP54920 295 aa15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 DACH1Q9UI36 760 aa15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 ZNF646O15015 1829 aaPredicted RBP15.95■□□□□ 0.14
RAB3IP-216ENST00000552199 SCN9AQ15858 1988 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 ECE2O60344 883 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 HLA-DOAP06340 250 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 SHMT1P34896 483 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 HDLBPQ00341 1268 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 DACT2Q5SW24 774 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
RAB3IP-216ENST00000552199 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms