RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 PRAMEF18Q5VWM3 479 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 KCTD1Q719H9 257 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 U2AF2P26368 475 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■□□□ 13.9
SLC38A1-210ENST00000552197 GSE1Q14687 1217 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 LZTS2Q9BRK4 669 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 GOLGA6L4A6NEF3 574 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 MBD3O95983 291 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 SLC16A2P36021 539 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 NLRP5P59047 1200 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 TTBK2Q6IQ55 1244 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 HEATR3Q7Z4Q2 680 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 TEPSINQ96N21 525 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
SLC38A1-210ENST00000552197 TBC1D12O60347 775 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 ZNF543Q08ER8 600 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 NOSTRINQ8IVI9 506 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 MKL1Q969V6 931 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 PIGSQ96S52 555 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 POLR2AP24928 1970 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 ECE1P42892 770 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 ASPRV1Q53RT3 343 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 NBPF12Q5TAG4 269 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 RRP36Q96EU6 259 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 SPZ1Q9BXG8 430 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 GGA3Q9NZ52 723 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 ZBTB21Q9ULJ3 1066 aa12.73□□□□□ -0.37
SLC38A1-210ENST00000552197 ELP1O95163 1332 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 F5H6K3 240 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 KRT2P35908 639 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 SLC1A4P43007 532 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 KLRC3Q07444 240 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 WWC2Q6AWC2 1192 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 SEC63Q9UGP8 760 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 CAP2P40123 477 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 STK38Q15208 465 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 ACER1Q8TDN7 264 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 FZD1Q9UP38 647 aa12.72□□□□□ -0.37
SLC38A1-210ENST00000552197 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 ME1P48163 572 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 SF3A1Q15459 793 aaKnown RBP12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 ADGRF4Q8IZF3 695 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SLC38A1-210ENST00000552197 NPY5RQ15761 445 aa12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 ZYXQ15942 572 aaKnown RBP12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 BICD2Q8TD16 824 aa12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 RIOX1Q9H6W3 641 aa12.71□□□□□ -0.38
SLC38A1-210ENST00000552197 NDUFB10O96000 172 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 APOBEC3FQ8IUX4 373 aaKnown RBP12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 BARHL2Q9NY43 387 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 USP17L10C9JJH3 530 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 STXBP3O00186 592 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 TOB1P50616 345 aaPredicted RBP12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 ZSCAN23Q3MJ62 389 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
SLC38A1-210ENST00000552197 SOCS7O14512 581 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 LIG1P18858 919 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 NAPAP54920 295 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 DCAF4Q8WV16 495 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 COA7Q96BR5 231 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 SH3GLB2Q9NR46 395 aa12.69□□□□□ -0.38
SLC38A1-210ENST00000552197 SPTLC2O15270 562 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms