RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SLC5A4Q9NY91 659 aa17.73■□□□□ 0.43
VPS29-209ENST00000551655 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
VPS29-209ENST00000551655 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
VPS29-209ENST00000551655 ZNF865P0CJ78 1059 aaPredicted RBP17.72■□□□□ 0.43
VPS29-209ENST00000551655 COG2Q14746 738 aa17.72■□□□□ 0.43
VPS29-209ENST00000551655 CERKLQ49MI3 558 aaPredicted RBP17.72■□□□□ 0.43
VPS29-209ENST00000551655 PRRC2BQ5JSZ5 2229 aaKnown RBP17.71■□□□□ 0.43
VPS29-209ENST00000551655 PARP14Q460N5 1801 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 CYP2C18P33260 490 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 SEPT2Q15019 361 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 KCNA10Q16322 511 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 KRT40Q6A162 431 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 PSRC1Q6PGN9 363 aaPredicted RBP17.71■□□□□ 0.43
VPS29-209ENST00000551655 ATF7IPQ6VMQ6 1270 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 ATG4CQ96DT6 458 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 MROH8Q9H579 483 aa17.71■□□□□ 0.43
VPS29-209ENST00000551655 ROBO3Q96MS0 1386 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 ERC2O15083 957 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 FCER1AP12319 257 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 AKR1A1P14550 325 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 SHMT1P34896 483 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 EVX2Q03828 476 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 AAK1Q2M2I8 961 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 ABRAQ8N0Z2 381 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 TMEM199Q8N511 208 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 HERVK_113Q902F9 699 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 SNX27Q96L92 541 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 MEIS3Q99687 375 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 TINF2Q9BSI4 451 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 UMODL1Q5DID0 1318 aa17.7■□□□□ 0.42
VPS29-209ENST00000551655 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
VPS29-209ENST00000551655 PPP2R2DQ66LE6 453 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 CCSAPQ6IQ19 270 aaPredicted RBP17.69■□□□□ 0.42
VPS29-209ENST00000551655 OTOP2Q7RTS6 562 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 MIGA1Q8NAN2 632 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 KLHDC9Q8NEP7 349 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
VPS29-209ENST00000551655 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
VPS29-209ENST00000551655 PIH1D3Q9NQM4 214 aaKnown RBP17.69■□□□□ 0.42
VPS29-209ENST00000551655 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 TLL1O43897 1013 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 GPR37L1O60883 481 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 DSG3P32926 999 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 CDK7P50613 346 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 TMEM132BQ14DG7 1078 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 MMP19Q99542 508 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 CERS4Q9HA82 394 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 CABP5Q9NP86 173 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 CD320Q9NPF0 282 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
VPS29-209ENST00000551655 MOXD2PA6NHM9 499 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 USP5P45974 858 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 PLCD1P51178 756 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 FAM126BQ8IXS8 530 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 SPICE1Q8N0Z3 855 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 MTCH2Q9Y6C9 303 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 WDFY4Q6ZS81 3184 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 ZNF521Q96K83 1311 aa17.67■□□□□ 0.42
VPS29-209ENST00000551655 EPOPA6NHQ4 379 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 ADCY6O43306 1168 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 FLOT1O75955 427 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 FGBP02675 491 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 CYP7A1P22680 504 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 MRE11P49959 708 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 GLT1D1Q96MS3 346 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 EHD4Q9H223 541 aa17.66■□□□□ 0.42
VPS29-209ENST00000551655 MPHOSPH10O00566 681 aaKnown RBP17.65■□□□□ 0.42
VPS29-209ENST00000551655 ASGR1P07306 291 aa17.65■□□□□ 0.42
VPS29-209ENST00000551655 ZAP70P43403 619 aa17.65■□□□□ 0.42
VPS29-209ENST00000551655 MB21D1Q8N884 522 aa17.65■□□□□ 0.42
VPS29-209ENST00000551655 MROH7Q68CQ1 1323 aa17.65■□□□□ 0.42
VPS29-209ENST00000551655 NAV1Q8NEY1 1877 aa17.65■□□□□ 0.42
VPS29-209ENST00000551655 ARVCFO00192 962 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 C6orf222P0C671 652 aaPredicted RBP17.64■□□□□ 0.41
VPS29-209ENST00000551655 CCL23P55773 120 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 DBNDD2Q9BQY9 259 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 ZHX1Q9UKY1 873 aaPredicted RBP17.64■□□□□ 0.41
VPS29-209ENST00000551655 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 ELP1O95163 1332 aa17.64■□□□□ 0.41
VPS29-209ENST00000551655 A0A0U1RQG5 324 aaPredicted RBP17.63■□□□□ 0.41
VPS29-209ENST00000551655 SMIM22K7EJ46 135 aa17.63■□□□□ 0.41
VPS29-209ENST00000551655 SNAI1O95863 264 aaPredicted RBP17.63■□□□□ 0.41
VPS29-209ENST00000551655 MTIF3Q9H2K0 278 aaKnown RBP17.63■□□□□ 0.41
VPS29-209ENST00000551655 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
VPS29-209ENST00000551655 FBXO28Q9NVF7 368 aa17.63■□□□□ 0.41
VPS29-209ENST00000551655 MCM3APO60318 1980 aa17.62■□□□□ 0.41
VPS29-209ENST00000551655 ARHGEF15O94989 841 aa17.62■□□□□ 0.41
VPS29-209ENST00000551655 CD4P01730 458 aa17.62■□□□□ 0.41
VPS29-209ENST00000551655 KCTD2Q14681 263 aa17.62■□□□□ 0.41
VPS29-209ENST00000551655 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms