RNA–Protein interactions for RNA: ENST00000550925.2

SH2B3-203, Transcript of SH2B adaptor protein 3, humanhuman

TSL 5

Gene SH2B3, Length 648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-203ENST00000550925 HOXA7P31268 230 aaPredicted RBP24.27■■□□□ 1.48
SH2B3-203ENST00000550925 MAP2K2P36507 400 aa24.27■■□□□ 1.48
SH2B3-203ENST00000550925 KIF23Q02241 960 aaPredicted RBP24.27■■□□□ 1.48
SH2B3-203ENST00000550925 ZNF543Q08ER8 600 aa24.27■■□□□ 1.48
SH2B3-203ENST00000550925 PABPC4Q13310 644 aaKnown RBP eCLIP24.27■■□□□ 1.48
SH2B3-203ENST00000550925 ASPRV1Q53RT3 343 aa24.27■■□□□ 1.48
SH2B3-203ENST00000550925 TREML2Q5T2D2 321 aa24.27■■□□□ 1.48
SH2B3-203ENST00000550925 GPATCH4Q5T3I0 446 aaKnown RBP24.27■■□□□ 1.48
SH2B3-203ENST00000550925 RLFQ13129 1914 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 GOLGA8BA8MQT2 603 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 RAD21O60216 631 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 PLA2G6O60733 806 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 TM4SF4P48230 202 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 GRM1Q13255 1194 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 FAM83BQ5T0W9 1011 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 RASGRP2Q7LDG7 609 aa24.26■■□□□ 1.47
SH2B3-203ENST00000550925 ZNF274Q96GC6 653 aaPredicted RBP24.26■■□□□ 1.47
SH2B3-203ENST00000550925 RPAP3Q9H6T3 665 aaPredicted RBP24.26■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L15C9J2P7 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 BTBD19C9JJ37 291 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L13C9JLJ4 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L11C9JVI0 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L18D6R9N7 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L22D6RA61 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L17D6RBQ6 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L19D6RCP7 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L20D6RJB6 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 AOC2O75106 756 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 PARP1P09874 1014 aaKnown RBP24.25■■□□□ 1.47
SH2B3-203ENST00000550925 KIF5BP33176 963 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 MCM2P49736 904 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 USP17L24Q0WX57 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 PPP2R5BQ15173 497 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 CCDC96Q2M329 555 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 MICU3Q86XE3 530 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 CTCFLQ8NI51 663 aaPredicted RBP24.25■■□□□ 1.47
SH2B3-203ENST00000550925 ZIC5Q96T25 663 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
SH2B3-203ENST00000550925 PTPN18Q99952 460 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 MYL10Q9BUA6 226 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 HPS5Q9UPZ3 1129 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 MYPNQ86TC9 1320 aa24.25■■□□□ 1.47
SH2B3-203ENST00000550925 PALM3A6NDB9 673 aaPredicted RBP24.24■■□□□ 1.47
SH2B3-203ENST00000550925 PDIA3P30101 505 aaKnown RBP24.24■■□□□ 1.47
SH2B3-203ENST00000550925 CATSPERGQ6ZRH7 1159 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 NUP133Q8WUM0 1156 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 MAD2L2Q9UI95 211 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 TPCN1Q9ULQ1 816 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 MTMR7Q9Y216 660 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 A0A0G2JMZ2 1700 aa24.24■■□□□ 1.47
SH2B3-203ENST00000550925 IGF2BP3O00425 579 aaKnown RBP eCLIP24.23■■□□□ 1.47
SH2B3-203ENST00000550925 BTNL9Q6UXG8 535 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 FAM160B2Q86V87 743 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 IFNL1Q8IU54 200 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 FANCBQ8NB91 859 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 TANGO6Q9C0B7 1094 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 RBM28Q9NW13 759 aaKnown RBP24.23■■□□□ 1.47
SH2B3-203ENST00000550925 FEM1BQ9UK73 627 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 PNMA3Q9UL41 463 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 LIMCH1Q9UPQ0 1083 aa24.23■■□□□ 1.47
SH2B3-203ENST00000550925 GOLGA8AA7E2F4 631 aa24.22■■□□□ 1.47
SH2B3-203ENST00000550925 METAP2P50579 478 aaKnown RBP eCLIP24.22■■□□□ 1.47
SH2B3-203ENST00000550925 STAT2P52630 851 aa24.22■■□□□ 1.47
SH2B3-203ENST00000550925 OTUD7BQ6GQQ9 843 aa24.22■■□□□ 1.47
SH2B3-203ENST00000550925 KCTD1Q719H9 257 aa24.22■■□□□ 1.47
SH2B3-203ENST00000550925 FRMPD2Q68DX3 1309 aaPredicted RBP24.21■■□□□ 1.47
SH2B3-203ENST00000550925 TMEM232C9JQI7 657 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 PDHXO00330 501 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 OSBPP22059 807 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 GNAQP50148 359 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 IRX3P78415 501 aaPredicted RBP24.21■■□□□ 1.47
SH2B3-203ENST00000550925 RTN1Q16799 776 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 CHURC1Q8WUH1 139 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 ZSCAN31Q96LW9 406 aaPredicted RBP24.21■■□□□ 1.47
SH2B3-203ENST00000550925 SLF1Q9BQI6 1058 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 LZTS2Q9BRK4 669 aa24.21■■□□□ 1.47
SH2B3-203ENST00000550925 NAP1L2Q9ULW6 460 aaPredicted RBP24.21■■□□□ 1.47
SH2B3-203ENST00000550925 CCDC196A0A1B0GTZ2 297 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 PFKFB2O60825 505 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 FLOT1O75955 427 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 CD2BP2O95400 341 aaKnown RBP24.2■■□□□ 1.46
SH2B3-203ENST00000550925 ALDH1A1P00352 501 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 RXRAP19793 462 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 SMARCA1P28370 1054 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 LBX2Q6XYB7 198 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 RAB11FIP4Q86YS3 637 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 PARK7Q99497 189 aaKnown RBP24.2■■□□□ 1.46
SH2B3-203ENST00000550925 ASCC2Q9H1I8 757 aaPredicted RBP24.2■■□□□ 1.46
SH2B3-203ENST00000550925 SH2B1Q9NRF2 756 aaPredicted RBP24.2■■□□□ 1.46
SH2B3-203ENST00000550925 PPP1R9AQ9ULJ8 1098 aa24.2■■□□□ 1.46
SH2B3-203ENST00000550925 GOLGA8HP0CJ92 632 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 COG2Q14746 738 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 ME3Q16798 604 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 TMTC3Q6ZXV5 915 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 STAG2Q8N3U4 1231 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 GTF3C2Q8WUA4 911 aaPredicted RBP24.19■■□□□ 1.46
SH2B3-203ENST00000550925 SNX21Q969T3 373 aa24.19■■□□□ 1.46
SH2B3-203ENST00000550925 LARP6Q9BRS8 491 aaKnown RBP24.19■■□□□ 1.46
SH2B3-203ENST00000550925 GPCPD1Q9NPB8 672 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms