RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 WNK4Q96J92 1243 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 CLMNQ96JQ2 1002 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 CRNKL1Q9BZJ0 848 aaKnown RBP8.56□□□□□ -1.04
KRR1-204ENST00000550898 LNPKQ9C0E8 428 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 ELP3Q9H9T3 547 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 GTF3C3Q9Y5Q9 886 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 ECM29Q5VYK3 1845 aa8.56□□□□□ -1.04
KRR1-204ENST00000550898 SALL3Q9BXA9 1300 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 TCRBV5S4A2TA0A5A2 114 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 MANSC4A6NHS7 340 aaPredicted RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 CTCFP49711 727 aaPredicted RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 SH3BP5LQ7L8J4 393 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 OPTNQ96CV9 577 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 FSD1Q9BTV5 496 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 ZFAND3Q9H8U3 227 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
KRR1-204ENST00000550898 PI4KBQ9UBF8 816 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 STAP2Q9UGK3 403 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 HERC5Q9UII4 1024 aaKnown RBP8.55□□□□□ -1.04
KRR1-204ENST00000550898 ZNF112Q9UJU3 913 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
KRR1-204ENST00000550898 FOXN1O15353 648 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 MBD4O95243 580 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 NEFLP07196 543 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 INPP5BP32019 993 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 CLK2P49760 499 aaKnown RBP8.54□□□□□ -1.04
KRR1-204ENST00000550898 PDE1AP54750 535 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
KRR1-204ENST00000550898 INHBEP58166 350 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 NOL9Q5SY16 702 aaKnown RBP8.54□□□□□ -1.04
KRR1-204ENST00000550898 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 ERO1BQ86YB8 467 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 AMOTL1Q8IY63 956 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 SCYL3Q8IZE3 742 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 CRACR2BQ8N4Y2 399 aaPredicted RBP8.54□□□□□ -1.04
KRR1-204ENST00000550898 APPBP2Q92624 585 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 ZKSCAN4Q969J2 545 aaPredicted RBP8.54□□□□□ -1.04
KRR1-204ENST00000550898 EVI5LQ96CN4 794 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 ZIC5Q96T25 663 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 GOPCQ9HD26 462 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 PICK1Q9NRD5 415 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
KRR1-204ENST00000550898 H3BM21 787 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 RNF113AO15541 343 aaKnown RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 ADH1CP00326 375 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 GRM5P41594 1212 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 GTF2A2P52657 109 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 MAP3K10Q02779 954 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 PPATQ06203 517 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 PPIL2Q13356 520 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 OTUD7BQ6GQQ9 843 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 MRPL14Q6P1L8 145 aaKnown RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 FOXP4Q8IVH2 680 aaPredicted RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 LCORLQ8N3X6 602 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 ARMT1Q9H993 441 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 ATP8A2Q9NTI2 1148 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
KRR1-204ENST00000550898 PALD1Q9ULE6 856 aa8.53□□□□□ -1.04
KRR1-204ENST00000550898 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 CTNND1O60716 968 aaKnown RBP8.52□□□□□ -1.05
KRR1-204ENST00000550898 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
KRR1-204ENST00000550898 HSPA8P11142 646 aaKnown RBP8.52□□□□□ -1.05
KRR1-204ENST00000550898 GNAT2P19087 354 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 TM4SF4P48230 202 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 SNAPC2Q13487 334 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 SDR42E1Q8WUS8 393 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 ITPKCQ96DU7 683 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 PUS7LQ9H0K6 701 aaKnown RBP8.52□□□□□ -1.05
KRR1-204ENST00000550898 EHD4Q9H223 541 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 DCP1AQ9NPI6 582 aaPredicted RBP8.52□□□□□ -1.05
KRR1-204ENST00000550898 RNF186Q9NXI6 227 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 MCM9Q9NXL9 1143 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 SERPINB13Q9UIV8 391 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 SLC4A4Q9Y6R1 1079 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 AKAP11Q9UKA4 1901 aa8.52□□□□□ -1.05
KRR1-204ENST00000550898 CCL15-CCL14A0A0B4J2E2 113 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 GPAA1O43292 621 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 CHGBP05060 677 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 CETPP11597 493 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 PTPRAP18433 802 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 CAP2P40123 477 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 LBX1P52954 281 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 CCL15Q16663 113 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 SLFNL1Q499Z3 407 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 PRPF38BQ5VTL8 546 aaKnown RBP8.51□□□□□ -1.05
KRR1-204ENST00000550898 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
KRR1-204ENST00000550898 TICAM2Q86XR7 235 aa8.51□□□□□ -1.05
KRR1-204ENST00000550898 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms