RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 CERS3Q8IU89 383 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
CBX5-204ENST00000550411 TRMT44Q8IYL2 757 aaKnown RBP8.29□□□□□ -1.08
CBX5-204ENST00000550411 KBTBD3Q8NAB2 608 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 GTF3C2Q8WUA4 911 aaPredicted RBP8.29□□□□□ -1.08
CBX5-204ENST00000550411 PAGR1Q9BTK6 254 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
CBX5-204ENST00000550411 TXNRD2Q9NNW7 524 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
CBX5-204ENST00000550411 RBPJLQ9UBG7 517 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 ZBTB21Q9ULJ3 1066 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 NCOR1O75376 2440 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 PFASO15067 1338 aa8.29□□□□□ -1.08
CBX5-204ENST00000550411 CYP2D7A0A087X1C5 515 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 ZKSCAN1P17029 563 aaPredicted RBP8.28□□□□□ -1.08
CBX5-204ENST00000550411 GUCY1A2P33402 732 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 RGS2P41220 211 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 USP5P45974 858 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 CACNB2Q08289 660 aaPredicted RBP8.28□□□□□ -1.08
CBX5-204ENST00000550411 UBE3CQ15386 1083 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 TATDN1Q6P1N9 297 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 PLEKHH3Q7Z736 793 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 SMC5Q8IY18 1101 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 TDHQ8IZJ6 230 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 SLC44A5Q8NCS7 719 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 USP6NLQ92738 828 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 CRNKL1Q9BZJ0 848 aaKnown RBP8.28□□□□□ -1.08
CBX5-204ENST00000550411 PORCNQ9H237 461 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 CWC22Q9HCG8 908 aaKnown RBP8.28□□□□□ -1.08
CBX5-204ENST00000550411 EPB41L4AQ9HCS5 686 aaPredicted RBP8.28□□□□□ -1.08
CBX5-204ENST00000550411 LAMA4Q16363 1823 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 TTC41PQ6P2S7 1318 aa8.28□□□□□ -1.08
CBX5-204ENST00000550411 ROBO3Q96MS0 1386 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 LAMA2P24043 3122 aaKnown RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 M0R2C6 588 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 FOXP2O15409 715 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 GH2P01242 217 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 IGHDP01880 384 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 COL6A1P12109 1028 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 MX1P20591 662 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 CCND3P30281 292 aaPredicted RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 MAGEA10P43363 369 aaPredicted RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 HIC1Q14526 733 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 CCL14Q16627 93 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 LRIT3Q3SXY7 679 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 MORN1Q5T089 497 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 POTEEQ6S8J3 1075 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 DYNLL2Q96FJ2 89 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 APBA2Q99767 749 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 ARID3AQ99856 593 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 TMEM121BQ9BXQ6 578 aaPredicted RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
CBX5-204ENST00000550411 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
CBX5-204ENST00000550411 LRRC37A2A6NM11 1700 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L15C9J2P7 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L13C9JLJ4 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L11C9JVI0 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L18D6R9N7 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L22D6RA61 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L17D6RBQ6 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L19D6RCP7 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L20D6RJB6 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 GLRX3O76003 335 aaKnown RBP8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP14P54578 494 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 PDE1AP54750 535 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 CCNA1P78396 465 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 USP17L24Q0WX57 530 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 ZYXQ15942 572 aaKnown RBP8.26□□□□□ -1.09
CBX5-204ENST00000550411 LHX8Q68G74 356 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 CATSPERGQ6ZRH7 1159 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 CLEC10AQ8IUN9 316 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 GPATCH3Q96I76 525 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 STRBPQ96SI9 672 aaKnown RBP8.26□□□□□ -1.09
CBX5-204ENST00000550411 SEC62Q99442 399 aaKnown RBP8.26□□□□□ -1.09
CBX5-204ENST00000550411 FEZ1Q99689 392 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.26□□□□□ -1.09
CBX5-204ENST00000550411 MCM9Q9NXL9 1143 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 RABGAP1Q9Y3P9 1069 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 PTPRSQ13332 1948 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 UNC80Q8N2C7 3258 aa8.26□□□□□ -1.09
CBX5-204ENST00000550411 LOXHD1Q8IVV2 1947 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 GSG1L2A8MUP6 293 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 RNF113AO15541 343 aaKnown RBP8.25□□□□□ -1.09
CBX5-204ENST00000550411 GPAA1O43292 621 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 CNMDO75829 334 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 IRX6P78412 446 aaPredicted RBP8.25□□□□□ -1.09
CBX5-204ENST00000550411 AAMPQ13685 434 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 RAB3GAP1Q15042 981 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 LRRC26Q2I0M4 334 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 ABCB5Q2M3G0 1257 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 CERKLQ49MI3 558 aaPredicted RBP8.25□□□□□ -1.09
CBX5-204ENST00000550411 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 ANKRD45Q5TZF3 282 aa8.25□□□□□ -1.09
CBX5-204ENST00000550411 C12orf60Q5U649 245 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms