RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SPA17Q15506 151 aa13.56□□□□□ -0.24
VDR-208ENST00000550325 RTN1Q16799 776 aa13.56□□□□□ -0.24
VDR-208ENST00000550325 KCTD19Q17RG1 926 aaPredicted RBP13.56□□□□□ -0.24
VDR-208ENST00000550325 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
VDR-208ENST00000550325 CCDC40Q4G0X9 1142 aa13.56□□□□□ -0.24
VDR-208ENST00000550325 ZKSCAN4Q969J2 545 aaPredicted RBP13.56□□□□□ -0.24
VDR-208ENST00000550325 GDAQ9Y2T3 454 aa13.56□□□□□ -0.24
VDR-208ENST00000550325 CHUKO15111 745 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 CYLC1P35663 651 aaPredicted RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 CCDC121Q6ZUS5 278 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 PRPF38AQ8NAV1 312 aaKnown RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 ERICH2A1L162 156 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 HERVK_113P62684 666 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 TTMPQ5BVD1 217 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 EHBP1Q8NDI1 1231 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
VDR-208ENST00000550325 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 FOXP2O15409 715 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 PAX7P23759 505 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 GPTP24298 496 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 CUL4BQ13620 913 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 TCP11X2Q5H9J9 407 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 TRIM47Q96LD4 638 aa13.55□□□□□ -0.24
VDR-208ENST00000550325 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.55□□□□□ -0.24
VDR-208ENST00000550325 PSMD14O00487 310 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 PDHBP11177 359 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 C8orf74Q6P047 294 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 TBC1D31Q96DN5 1066 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 LRWD1Q9UFC0 647 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 TARSL2A2RTX5 802 aaKnown RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 NCK2O43639 380 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 PBX1P40424 430 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 PAFAH1B1P43034 410 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 NAPBQ9H115 298 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 RCCD1A6NED2 376 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 SKAP2O75563 359 aaPredicted RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
VDR-208ENST00000550325 ATF3P18847 181 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 AMOTL1Q8IY63 956 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 RPGRIP1Q96KN7 1286 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 AGPAT5Q9NUQ2 364 aa13.54□□□□□ -0.24
VDR-208ENST00000550325 ZC3H4Q9UPT8 1303 aaKnown RBP13.53□□□□□ -0.24
VDR-208ENST00000550325 B4DLN1 442 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 MOCS3O95396 460 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 SPAG1Q07617 926 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 NFU1Q9UMS0 254 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 LSP1P33241 339 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 KLK7P49862 253 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 VAV2P52735 878 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
VDR-208ENST00000550325 AKAP12Q02952 1782 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
VDR-208ENST00000550325 TRIM14Q14142 442 aa13.53□□□□□ -0.24
VDR-208ENST00000550325 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
VDR-208ENST00000550325 ZNF473Q8WTR7 871 aaKnown RBP13.53□□□□□ -0.24
VDR-208ENST00000550325 MYH8P13535 1937 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 GOLGA6L10A6NI86 522 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 TACC1O75410 805 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 EZRP15311 586 aaKnown RBP13.52□□□□□ -0.24
VDR-208ENST00000550325 CCDC13Q8IYE1 715 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 NHEJ1Q9H9Q4 299 aaPredicted RBP13.52□□□□□ -0.24
VDR-208ENST00000550325 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.24
VDR-208ENST00000550325 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 GSDMAQ96QA5 445 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.25
VDR-208ENST00000550325 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 NR1D1P20393 614 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 MCM7P33993 719 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 GUCY2DQ02846 1103 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 WTAPQ15007 396 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 NTRK3Q16288 839 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
VDR-208ENST00000550325 CPDO75976 1380 aa13.52□□□□□ -0.25
VDR-208ENST00000550325 ZSCAN5CA6NGD5 496 aaPredicted RBP13.51□□□□□ -0.25
VDR-208ENST00000550325 BUB1O43683 1085 aa13.51□□□□□ -0.25
VDR-208ENST00000550325 USO1O60763 962 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms