RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TMEM132EQ6IEE7 984 aa6.41□□□□□ -1.38
SNRPF-202ENST00000549580 DACT3Q96B18 629 aaPredicted RBP6.41□□□□□ -1.38
SNRPF-202ENST00000549580 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
SNRPF-202ENST00000549580 CYP8B1Q9UNU6 501 aa6.41□□□□□ -1.38
SNRPF-202ENST00000549580 TTF2Q9UNY4 1162 aaKnown RBP6.41□□□□□ -1.38
SNRPF-202ENST00000549580 DNAJA1P31689 397 aaKnown RBP6.4□□□□□ -1.38
SNRPF-202ENST00000549580 KIR3DL1P43629 444 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 EGR3Q06889 387 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 RBL2Q08999 1139 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 PAK2Q13177 524 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 PWP1Q13610 501 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 GAB4Q2WGN9 574 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 SV2BQ7L1I2 683 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 VPS37DQ86XT2 251 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 LILRA2Q8N149 483 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 RASGRP4Q8TDF6 673 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
SNRPF-202ENST00000549580 INTS4Q96HW7 963 aaKnown RBP6.4□□□□□ -1.38
SNRPF-202ENST00000549580 EBF1Q9UH73 591 aa6.4□□□□□ -1.38
SNRPF-202ENST00000549580 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 FGRP09769 529 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 INSRRP14616 1297 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 PI3P19957 117 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 CYP7A1P22680 504 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNRPF-202ENST00000549580 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
SNRPF-202ENST00000549580 ZNF746Q6NUN9 644 aaPredicted RBP6.39□□□□□ -1.39
SNRPF-202ENST00000549580 MCF2L2Q86YR7 1114 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 PDZD8Q8NEN9 1154 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 GPRASP2Q96D09 838 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 TEPSINQ96N21 525 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
SNRPF-202ENST00000549580 KCNQ5Q9NR82 932 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 ADAMTS1Q9UHI8 967 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 MYRFQ9Y2G1 1151 aa6.39□□□□□ -1.39
SNRPF-202ENST00000549580 YBX2Q9Y2T7 364 aaKnown RBP6.39□□□□□ -1.39
SNRPF-202ENST00000549580 AKAP8O43823 692 aaKnown RBP6.38□□□□□ -1.39
SNRPF-202ENST00000549580 RLBP1P12271 317 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 ATF4P18848 351 aaPredicted RBP6.38□□□□□ -1.39
SNRPF-202ENST00000549580 PDE6BP35913 854 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 VMACQ2NL98 169 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 DPH6Q7L8W6 267 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 RELL1Q8IUW5 271 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 TMEM74Q96NL1 305 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 TJP2Q9UDY2 1190 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 DUSP13Q9UII6 198 aa6.38□□□□□ -1.39
SNRPF-202ENST00000549580 GTF2F1P35269 517 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNRPF-202ENST00000549580 AFF3P51826 1226 aaKnown RBP6.37□□□□□ -1.39
SNRPF-202ENST00000549580 NR0B2Q15466 257 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 KIAA0825Q8IV33 1275 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 SIRT2Q8IXJ6 389 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 ZDHHC14Q8IZN3 488 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 FAM177A1Q8N128 213 aaPredicted RBP6.37□□□□□ -1.39
SNRPF-202ENST00000549580 PIWIL2Q8TC59 973 aaKnown RBP6.37□□□□□ -1.39
SNRPF-202ENST00000549580 RHOVQ96L33 236 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 DNAJC2Q99543 621 aaKnown RBP6.37□□□□□ -1.39
SNRPF-202ENST00000549580 SPON2Q9BUD6 331 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 ADAM7Q9H2U9 754 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 PCDHA11Q9Y5I1 949 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 SNCAIPQ9Y6H5 919 aa6.37□□□□□ -1.39
SNRPF-202ENST00000549580 LRRN2O75325 713 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 EFEMP2O95967 443 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 EIF4A3P38919 411 aaKnown RBP6.36□□□□□ -1.39
SNRPF-202ENST00000549580 PHC3Q8NDX5 983 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 SHISA4Q96DD7 197 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 SPATA32Q96LK8 384 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 LNPKQ9C0E8 428 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 EPB41L4AQ9HCS5 686 aaPredicted RBP6.36□□□□□ -1.39
SNRPF-202ENST00000549580 GPR160Q9UJ42 338 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 PCDHB5Q9Y5E4 795 aa6.36□□□□□ -1.39
SNRPF-202ENST00000549580 CADPSQ9ULU8 1353 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 GFRA2O00451 464 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 GARTP22102 1010 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
SNRPF-202ENST00000549580 SEPT6Q14141 434 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 OXR1Q8N573 874 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 ZNF296Q8WUU4 475 aaPredicted RBP6.35□□□□□ -1.39
SNRPF-202ENST00000549580 EAF1Q96JC9 268 aaPredicted RBP6.35□□□□□ -1.39
SNRPF-202ENST00000549580 SIGLEC10Q96LC7 697 aa6.35□□□□□ -1.39
SNRPF-202ENST00000549580 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.35□□□□□ -1.398e-8■■■□□ 15.1
SNRPF-202ENST00000549580 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
SNRPF-202ENST00000549580 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
SNRPF-202ENST00000549580 FITM1A5D6W6 292 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 MINDY4BA8MYZ0 360 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 OVOL3O00110 214 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 GREM1O60565 184 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 LTKP29376 864 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 LIG3P49916 1009 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 LMNB2Q03252 620 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 SOGA3Q5TF21 947 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 NOP9Q86U38 636 aaKnown RBP6.34□□□□□ -1.39
SNRPF-202ENST00000549580 TSPYL5Q86VY4 417 aaPredicted RBP6.34□□□□□ -1.39
SNRPF-202ENST00000549580 SP8Q8IXZ3 490 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 COX4I2Q96KJ9 171 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 NT5C1AQ9BXI3 368 aa6.34□□□□□ -1.39
SNRPF-202ENST00000549580 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms