RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 COBLO75128 1261 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
TROAP-210ENST00000549534 FOXO4P98177 505 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 SIGLEC14Q08ET2 396 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
TROAP-210ENST00000549534 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 MAML3Q96JK9 1138 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
TROAP-210ENST00000549534 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 CCL23P55773 120 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
TROAP-210ENST00000549534 TTLL4Q14679 1199 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 SHCBP1Q8NEM2 672 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
TROAP-210ENST00000549534 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
TROAP-210ENST00000549534 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 ANP32CO43423 234 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 NOC4LQ9BVI4 516 aaKnown RBP13.22□□□□□ -0.29
TROAP-210ENST00000549534 SEZ6LQ9BYH1 1024 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 WNT8AQ9H1J5 351 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
TROAP-210ENST00000549534 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 BTBD7Q9P203 1132 aa13.22□□□□□ -0.29
TROAP-210ENST00000549534 HERC5Q9UII4 1024 aaKnown RBP13.22□□□□□ -0.29
TROAP-210ENST00000549534 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.29
TROAP-210ENST00000549534 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
TROAP-210ENST00000549534 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
TROAP-210ENST00000549534 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
TROAP-210ENST00000549534 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
TROAP-210ENST00000549534 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
TROAP-210ENST00000549534 VWCEQ96DN2 955 aa13.21□□□□□ -0.29
TROAP-210ENST00000549534 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
TROAP-210ENST00000549534 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.29
TROAP-210ENST00000549534 MAP1BP46821 2468 aaKnown RBP13.2□□□□□ -0.3
TROAP-210ENST00000549534 NCK2O43639 380 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 ASGR1P07306 291 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 ZNF865P0CJ78 1059 aaPredicted RBP13.2□□□□□ -0.3
TROAP-210ENST00000549534 PRDX5P30044 214 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 ERVK-21P61565 698 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 PICALMQ13492 652 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 TIGD5Q53EQ6 642 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
TROAP-210ENST00000549534 RALYQ9UKM9 306 aaKnown RBP13.2□□□□□ -0.3
TROAP-210ENST00000549534 DMXL1Q9Y485 3027 aa13.2□□□□□ -0.3
TROAP-210ENST00000549534 DUSP11O75319 330 aaKnown RBP13.19□□□□□ -0.3
TROAP-210ENST00000549534 PTPROQ16827 1216 aa13.19□□□□□ -0.3
TROAP-210ENST00000549534 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
TROAP-210ENST00000549534 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
TROAP-210ENST00000549534 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
TROAP-210ENST00000549534 MROH8Q9H579 483 aa13.19□□□□□ -0.3
TROAP-210ENST00000549534 SPC25Q9HBM1 224 aa13.19□□□□□ -0.3
TROAP-210ENST00000549534 TNKSO95271 1327 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 SALL1Q9NSC2 1324 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 STXBP3O00186 592 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 MRPL38Q96DV4 380 aaKnown RBP13.18□□□□□ -0.3
TROAP-210ENST00000549534 FAM184BQ9ULE4 1060 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 DIS3Q9Y2L1 958 aaKnown RBP13.18□□□□□ -0.3
TROAP-210ENST00000549534 VPS13AQ96RL7 3174 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 ZNF292O60281 2723 aa13.18□□□□□ -0.3
TROAP-210ENST00000549534 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
TROAP-210ENST00000549534 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
TROAP-210ENST00000549534 ERCC3P19447 782 aa13.17□□□□□ -0.3
TROAP-210ENST00000549534 RFC2P35250 354 aa13.17□□□□□ -0.3
TROAP-210ENST00000549534 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
TROAP-210ENST00000549534 FAM163AQ96GL9 167 aaPredicted RBP13.17□□□□□ -0.3
TROAP-210ENST00000549534 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
TROAP-210ENST00000549534 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
TROAP-210ENST00000549534 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
TROAP-210ENST00000549534 MBTPS2O43462 519 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 PDE8BO95263 885 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 SDHBP21912 280 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
TROAP-210ENST00000549534 SCLYQ96I15 445 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 SPATC1LQ9H0A9 340 aa13.16□□□□□ -0.3
TROAP-210ENST00000549534 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
TROAP-210ENST00000549534 MYADML2A6NDP7 307 aa13.15□□□□□ -0.3
TROAP-210ENST00000549534 CABYRO75952 493 aa13.15□□□□□ -0.3
TROAP-210ENST00000549534 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
TROAP-210ENST00000549534 C6orf222P0C671 652 aaPredicted RBP13.15□□□□□ -0.3
TROAP-210ENST00000549534 FCER1AP12319 257 aa13.15□□□□□ -0.3
TROAP-210ENST00000549534 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
TROAP-210ENST00000549534 USP14P54578 494 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms