RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CPVLQ9H3G5 476 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 POLR3EQ9NVU0 708 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 PARP3Q9Y6F1 533 aa12.61□□□□□ -0.39
LINC00661-204ENST00000549354 A0A1W2PQ27 194 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 A0A1W2PQ64 194 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 GRIK5Q16478 980 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 MASTLQ96GX5 879 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 ECM29Q5VYK3 1845 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 DDX60LQ5H9U9 1706 aaKnown RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 USP17L21D6R901 530 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 CMA1P23946 247 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 WTAPQ15007 396 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 GPR101Q96P66 508 aaPredicted RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 IMPACTQ9P2X3 320 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 YEATS4O95619 227 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 IFNAR1P17181 557 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 MCM6Q14566 821 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 SLC39A14Q15043 492 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
LINC00661-204ENST00000549354 V9GY48 417 aaPredicted RBP12.6□□□□□ -0.39
LINC00661-204ENST00000549354 GAKO14976 1311 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 GPR75-ASB3A0A0A6YYF3 556 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 ERICH2A1L162 156 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 ANKRD65E5RJM6 399 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 BMP6P22004 513 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 KIF2AO00139 706 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 TEX33O43247 280 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 VPS16Q9H269 839 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 MYH2Q9UKX2 1941 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 BAG3O95817 575 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 CASQ1P31415 396 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 HNRNPH2P55795 449 aaKnown RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
LINC00661-204ENST00000549354 RHOXF2Q9BQY4 288 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
LINC00661-204ENST00000549354 SASH3O75995 380 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 SLC15A2Q16348 729 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 BRAPQ7Z569 592 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 BAG1Q99933 345 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-204ENST00000549354 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 ARGLU1Q9NWB6 273 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-204ENST00000549354 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-204ENST00000549354 SOWAHDA6NJG2 315 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 ENAHQ8N8S7 591 aaPredicted RBP12.58□□□□□ -0.4
LINC00661-204ENST00000549354 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 TNKSO95271 1327 aa12.58□□□□□ -0.4
LINC00661-204ENST00000549354 MCM7P33993 719 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
LINC00661-204ENST00000549354 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 REXO1L1PQ8IX06 675 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
LINC00661-204ENST00000549354 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 ANKS1AQ92625 1134 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 SUGCTQ9HAC7 445 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 WNT7AO00755 349 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 ABL1P00519 1130 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 RTN1Q16799 776 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
LINC00661-204ENST00000549354 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
LINC00661-204ENST00000549354 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 ZMYND10O75800 440 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 OAS2P29728 719 aaKnown RBP12.56□□□□□ -0.4
LINC00661-204ENST00000549354 FAM193AP78312 1265 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 DIXDC1Q155Q3 683 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 PSMB7Q99436 277 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 PLCG2P16885 1265 aa12.56□□□□□ -0.4
LINC00661-204ENST00000549354 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
LINC00661-204ENST00000549354 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms