RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PLXNA4Q9HCM2 1894 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 A0A0G2JLL6 359 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 RASA1P20936 1047 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 DHX8Q14562 1220 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 SF3A1Q15459 793 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 GPATCH4Q5T3I0 446 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 PRRT2Q7Z6L0 340 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 LTV1Q96GA3 475 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 RTEL1Q9NZ71 1219 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 SRP68Q9UHB9 627 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 OBSL1O75147 1896 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 DNAJC25-GNG10A0A024R161 153 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 BAG3O95817 575 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 FAM163BP0C2L3 166 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 MAMDC4Q6UXC1 1216 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 CRNKL1Q9BZJ0 848 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 UPF3AQ9H1J1 476 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 NUP210Q8TEM1 1887 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NDUFV2P19404 249 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 C1orf53Q5VUE5 145 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 TMEM179Q6ZVK1 233 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 TMTC3Q6ZXV5 915 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 SH3BP5LQ7L8J4 393 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ADGRA1Q86SQ6 560 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NEK9Q8TD19 979 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 TMEM51Q9NW97 253 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 COL1A2P08123 1366 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 MMP10P09238 476 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 GCFC2P16383 781 aaKnown RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PDCP20941 246 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PAX3P23760 479 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PPP1R2P41236 205 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PCBP1Q15365 356 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PKN1Q16512 942 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NOL8Q76FK4 1167 aaKnown RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 C2CD5Q86YS7 1000 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NCOA7Q8NI08 942 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NFKBIZQ9BYH8 718 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 DNAJC18Q9H819 358 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 GPRC5DQ9NZD1 345 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 RBM8AQ9Y5S9 174 aaKnown RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 MAFGO15525 162 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 GPAA1O43292 621 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 MARCH6O60337 910 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 CDKL5O76039 1030 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ADORA1P30542 326 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ZAP70P43403 619 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 FXR2P51116 673 aaKnown RBP eCLIP5.73□□□□□ -1.496e-7■■■□□ 14.8
SCAF11-212ENST00000549162 PRMT2P55345 433 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PPARAQ07869 468 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PPIL2Q13356 520 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 PFKFB3Q16875 520 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 KIAA1958Q8N8K9 716 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 NSUN7Q8NE18 718 aaKnown RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ADARB2Q9NS39 739 aaKnown RBP5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ADGRG1Q9Y653 693 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ZNF532Q9HCE3 1301 aa5.73□□□□□ -1.49
SCAF11-212ENST00000549162 ECE2O60344 883 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 OATP04181 439 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 BMT2Q1RMZ1 405 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TSNAXIP1Q2TAA8 658 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 SKOR2Q2VWA4 1001 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 DALRD3Q5D0E6 543 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 C12orf56Q8IXR9 622 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 MAD2L2Q9UI95 211 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 CCDC196A0A1B0GTZ2 297 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 EDIL3O43854 480 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 CDC25BP30305 580 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 MCM5P33992 734 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 PIP4K2BP78356 416 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 PTPAQ15257 358 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 HS1BP3Q53T59 392 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 METTL24Q5JXM2 366 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ZNF589Q86UQ0 364 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 RPGRQ92834 1020 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 AK8Q96MA6 479 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 DUSP9Q99956 384 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 SPON1Q9HCB6 807 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 BIN2Q9UBW5 565 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ANGEL1Q9UNK9 670 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ZDHHC9Q9Y397 364 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 LETM1O95202 739 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TOP1P11387 765 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 POLD1P28340 1107 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TM4SF4P48230 202 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 SARSP49591 514 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 SCNN1DP51172 638 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 PPATQ06203 517 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TNFAIP1Q13829 316 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ELOAQ14241 798 aaKnown RBP5.72□□□□□ -1.49
SCAF11-212ENST00000549162 PDIA5Q14554 519 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TTC39AQ5SRH9 613 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 ANKRD45Q5TZF3 282 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 TTC6Q86TZ1 520 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 SYNE4Q8N205 404 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 AFAP1L1Q8TED9 768 aa5.72□□□□□ -1.49
SCAF11-212ENST00000549162 MAGEB6P1A0A0J9YX57 407 aa5.71□□□□□ -1.49
SCAF11-212ENST00000549162 WDR46O15213 610 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms