RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 HOXC6P09630 235 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
PFDN5-206ENST00000548984 PTPREP23469 700 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 NT5C2P49902 561 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-206ENST00000548984 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 ABRAQ8N0Z2 381 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 MKL1Q969V6 931 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 ATG4CQ96DT6 458 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 CEP95Q96GE4 821 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 FAM227BQ96M60 508 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 MOV10L1Q9BXT6 1211 aaKnown RBP12.14□□□□□ -0.47
PFDN5-206ENST00000548984 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-206ENST00000548984 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 MTMR4Q9NYA4 1195 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
PFDN5-206ENST00000548984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.14□□□□□ -0.47
PFDN5-206ENST00000548984 F5H6K3 240 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 ORC4O43929 436 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 RAD21O60216 631 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 FARP2O94887 1054 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-206ENST00000548984 NDUFB10O96000 172 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 SDSP20132 328 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 TFAP4Q01664 338 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 KLRC3Q07444 240 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 ERICH6BQ5W0A0 696 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 SLF1Q9BQI6 1058 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 HTATIP2Q9BUP3 242 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
PFDN5-206ENST00000548984 LAMA4Q16363 1823 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
PFDN5-206ENST00000548984 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
PFDN5-206ENST00000548984 ERCC3P19447 782 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 PLS1Q14651 629 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 UBE2Q1Q7Z7E8 422 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 DEFB118Q96PH6 123 aa12.12□□□□□ -0.47
PFDN5-206ENST00000548984 VWA5AO00534 786 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 FGAP02671 866 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
PFDN5-206ENST00000548984 FGRP09769 529 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 FDX1P10109 184 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 CTDSPL2Q05D32 466 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 TMEM132BQ14DG7 1078 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 ZNF589Q86UQ0 364 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-206ENST00000548984 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 RIOX2Q8IUF8 465 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 PRPF38AQ8NAV1 312 aaKnown RBP12.11□□□□□ -0.47
PFDN5-206ENST00000548984 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-206ENST00000548984 FBXO28Q9NVF7 368 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 FEM1BQ9UK73 627 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 COL11A1P12107 1806 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-206ENST00000548984 RAD50Q92878 1312 aa12.11□□□□□ -0.47
PFDN5-206ENST00000548984 MSCO60682 206 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 FCER1AP12319 257 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 ADORA2AP29274 412 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 STAT3P40763 770 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 CACNB2Q08289 660 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-206ENST00000548984 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 TTC22Q5TAA0 569 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-206ENST00000548984 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
PFDN5-206ENST00000548984 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
PFDN5-206ENST00000548984 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-206ENST00000548984 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-206ENST00000548984 BRCA2P51587 3418 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 ATP2A1O14983 1001 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
PFDN5-206ENST00000548984 ZBED4O75132 1171 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 BMP3P12645 472 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 NOVP48745 357 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 OAZ1P54368 228 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-206ENST00000548984 TRIM32Q13049 653 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 KCTD2Q14681 263 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 CCL14Q16627 93 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
PFDN5-206ENST00000548984 FAM160B2Q86V87 743 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-206ENST00000548984 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 OGDHLQ9ULD0 1010 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
PFDN5-206ENST00000548984 PLA2G6O60733 806 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms