RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 WNK4Q96J92 1243 aa19■□□□□ 0.63
HECTD4-206ENST00000548140 NUP88Q99567 741 aaPredicted RBP19■□□□□ 0.63
HECTD4-206ENST00000548140 GPCPD1Q9NPB8 672 aa19■□□□□ 0.63
HECTD4-206ENST00000548140 EMILIN3Q9NT22 766 aa19■□□□□ 0.63
HECTD4-206ENST00000548140 FAM217BQ9NTX9 383 aaPredicted RBP19■□□□□ 0.63
HECTD4-206ENST00000548140 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
HECTD4-206ENST00000548140 NID2Q14112 1375 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 CPLX1O14810 134 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
HECTD4-206ENST00000548140 BMP3P12645 472 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 ZNF157P51786 506 aaPredicted RBP18.99■□□□□ 0.63
HECTD4-206ENST00000548140 ZNF543Q08ER8 600 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 ST3GAL1Q11201 340 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 ASPRV1Q53RT3 343 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 LPAR1Q92633 364 aa18.99■□□□□ 0.63
HECTD4-206ENST00000548140 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
HECTD4-206ENST00000548140 PALM3A6NDB9 673 aaPredicted RBP18.98■□□□□ 0.63
HECTD4-206ENST00000548140 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
HECTD4-206ENST00000548140 SLC4A3P48751 1232 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 GNAQP50148 359 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
HECTD4-206ENST00000548140 CUL4AQ13619 759 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 SH3D19Q5HYK7 790 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 GPATCH4Q5T3I0 446 aaKnown RBP18.98■□□□□ 0.63
HECTD4-206ENST00000548140 RGMBQ6NW40 437 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
HECTD4-206ENST00000548140 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
HECTD4-206ENST00000548140 KLRF2D3W0D1 207 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 WDR46O15213 610 aaKnown RBP18.97■□□□□ 0.63
HECTD4-206ENST00000548140 PLEKHA8P1O95397 391 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 APLP1P51693 650 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 GADL1Q6ZQY3 521 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 CMTR1Q8N1G2 835 aaKnown RBP18.97■□□□□ 0.63
HECTD4-206ENST00000548140 CCDC82Q8N4S0 544 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 C12orf42Q96LP6 360 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
HECTD4-206ENST00000548140 A0A0G2JLL6 359 aaPredicted RBP18.96■□□□□ 0.63
HECTD4-206ENST00000548140 TMEM232C9JQI7 657 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 DTNBO60941 627 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 VCAM1P19320 739 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 IKQ13123 557 aaPredicted RBP18.96■□□□□ 0.63
HECTD4-206ENST00000548140 SNAPC2Q13487 334 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 TTBK2Q6IQ55 1244 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 TMTC3Q6ZXV5 915 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 PRRT2Q7Z6L0 340 aaPredicted RBP18.96■□□□□ 0.63
HECTD4-206ENST00000548140 RASAL3Q86YV0 1011 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 LZTS2Q9BRK4 669 aa18.96■□□□□ 0.63
HECTD4-206ENST00000548140 PPFIA3O75145 1194 aa18.95■□□□□ 0.62
HECTD4-206ENST00000548140 ZBTB48P10074 688 aaPredicted RBP18.95■□□□□ 0.62
HECTD4-206ENST00000548140 NTRK3Q16288 839 aa18.95■□□□□ 0.62
HECTD4-206ENST00000548140 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
HECTD4-206ENST00000548140 UBA5Q9GZZ9 404 aa18.95■□□□□ 0.62
HECTD4-206ENST00000548140 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
HECTD4-206ENST00000548140 RPAP3Q9H6T3 665 aaPredicted RBP18.95■□□□□ 0.62
HECTD4-206ENST00000548140 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.95■□□□□ 0.62
HECTD4-206ENST00000548140 CDKL5O76039 1030 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 CTDNEP1O95476 244 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 IFNAR1P17181 557 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 SLC16A2P36021 539 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 GTF2A2P52657 109 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
HECTD4-206ENST00000548140 NBPF11Q86T75 865 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 PHKBQ93100 1093 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
HECTD4-206ENST00000548140 TANGO6Q9C0B7 1094 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 CREBZFQ9NS37 354 aa18.94■□□□□ 0.62
HECTD4-206ENST00000548140 STAT2P52630 851 aa18.93■□□□□ 0.62
HECTD4-206ENST00000548140 SAMD1Q6SPF0 538 aaPredicted RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 FASTKD5Q7L8L6 764 aaKnown RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 PROCA1Q8NCQ7 364 aaPredicted RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 NSUN7Q8NE18 718 aaKnown RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 INTS4Q96HW7 963 aaKnown RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 HHIPL1Q96JK4 782 aa18.93■□□□□ 0.62
HECTD4-206ENST00000548140 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
HECTD4-206ENST00000548140 VAT1LQ9HCJ6 419 aa18.93■□□□□ 0.62
HECTD4-206ENST00000548140 PTPDC1A2A3K4 754 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 JAK2O60674 1132 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 SLC10A3P09131 477 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 CETPP11597 493 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 SSRP1Q08945 709 aaKnown RBP18.92■□□□□ 0.62
HECTD4-206ENST00000548140 FUT2Q10981 343 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 TREML2Q5T2D2 321 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 CHURC1Q8WUH1 139 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 DDX11Q96FC9 970 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 FEM1BQ9UK73 627 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 SMC3Q9UQE7 1217 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 CNTNAP5Q8WYK1 1306 aa18.92■□□□□ 0.62
HECTD4-206ENST00000548140 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L15C9J2P7 530 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L13C9JLJ4 530 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L11C9JVI0 530 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L18D6R9N7 530 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L22D6RA61 530 aa18.91■□□□□ 0.62
HECTD4-206ENST00000548140 USP17L17D6RBQ6 530 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms