RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 MYO1BO43795 1136 aa21.27■■□□□ 1
VDR-204ENST00000547065 NEMFO60524 1076 aa21.27■■□□□ 1
VDR-204ENST00000547065 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
VDR-204ENST00000547065 PDILTQ8N807 584 aa21.27■■□□□ 1
VDR-204ENST00000547065 TRIML1Q8N9V2 468 aa21.27■■□□□ 1
VDR-204ENST00000547065 SMARCE1Q969G3 411 aa21.27■■□□□ 1
VDR-204ENST00000547065 DDX4Q9NQI0 724 aaKnown RBP21.27■■□□□ 1
VDR-204ENST00000547065 MAN1B1Q9UKM7 699 aa21.27■■□□□ 1
VDR-204ENST00000547065 SLFN14P0C7P3 912 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 SCNN1DP51172 638 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 MYL5Q02045 173 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 ARL6IP4Q66PJ3 421 aaKnown RBP21.26■□□□□ 0.99
VDR-204ENST00000547065 APOBEC3HQ6NTF7 200 aaKnown RBP21.26■□□□□ 0.99
VDR-204ENST00000547065 HEATR3Q7Z4Q2 680 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 CCDC12Q8WUD4 166 aaPredicted RBP21.26■□□□□ 0.99
VDR-204ENST00000547065 SYMPKQ92797 1274 aaKnown RBP21.26■□□□□ 0.99
VDR-204ENST00000547065 EPSTI1Q96J88 318 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 PYM1Q9BRP8 204 aaKnown RBP21.26■□□□□ 0.99
VDR-204ENST00000547065 MTMR4Q9NYA4 1195 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 MYO3BQ8WXR4 1341 aa21.26■□□□□ 0.99
VDR-204ENST00000547065 ADAMTS3O15072 1205 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 SMC2O95347 1197 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 GOLGA8HP0CJ92 632 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 MLKLQ8NB16 471 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 CNKSR1Q969H4 720 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 RRP36Q96EU6 259 aaKnown RBP21.25■□□□□ 0.99
VDR-204ENST00000547065 DACH1Q9UI36 760 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 SERPINB13Q9UIV8 391 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 PCDHA6Q9UN73 950 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 PCDHA8Q9Y5H6 950 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 MYH1P12882 1939 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 IGKV6D-41A0A0C4DH26 115 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 CCDC194A0A1B0GVG4 234 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 VWA3AA6NCI4 1184 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 MCM7P33993 719 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 CRKP46108 304 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 CCDC144BQ3MJ40 725 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 STRIP1Q5VSL9 837 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 TYW1BQ6NUM6 668 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 USP17L2Q6R6M4 530 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 SPATA20Q8TB22 786 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 DHX58Q96C10 678 aa21.25■□□□□ 0.99
VDR-204ENST00000547065 OSBPL5Q9H0X9 879 aaPredicted RBP21.25■□□□□ 0.99
VDR-204ENST00000547065 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
VDR-204ENST00000547065 HDLBPQ00341 1268 aaKnown RBP21.24■□□□□ 0.99
VDR-204ENST00000547065 MORC3Q14149 939 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 SH3RF1Q7Z6J0 888 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 C4orf32Q8N8J7 132 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 ZDHHC15Q96MV8 337 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 DBNDD1Q9H9R9 158 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 IMPACTQ9P2X3 320 aa21.24■□□□□ 0.99
VDR-204ENST00000547065 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 PRR29P0C7W0 189 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 BMP6P22004 513 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 ZMYND12Q9H0C1 365 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 R3HCC1Q9Y3T6 440 aaKnown RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 A0A087X0B3 334 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 USP17L5A8MUK1 530 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 AKR1B1P15121 316 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 LONP1P36776 959 aaKnown RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 CT47A1Q5JQC4 288 aaPredicted RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 C17orf53Q8N3J3 647 aaPredicted RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 CACTINQ8WUQ7 758 aaKnown RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 PAGE5Q96GU1 130 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 IFNKQ9P0W0 207 aa21.23■□□□□ 0.99
VDR-204ENST00000547065 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
VDR-204ENST00000547065 GNA11P29992 359 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 GSDMDP57764 484 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 FANCCQ00597 558 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 LRMPQ12912 555 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 ASPRV1Q53RT3 343 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 PPP4R3BQ5MIZ7 849 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 LRRC8AQ8IWT6 810 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 GRAMD1CQ8IYS0 662 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 IQUBQ8NA54 791 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 XPO4Q9C0E2 1151 aaKnown RBP21.22■□□□□ 0.99
VDR-204ENST00000547065 RIOX1Q9H6W3 641 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 C6orf50Q9HD87 102 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
VDR-204ENST00000547065 TTLL1O95922 423 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 PDHBP11177 359 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 LMOD1P29536 600 aaPredicted RBP21.21■□□□□ 0.99
VDR-204ENST00000547065 NAPAP54920 295 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 DHX8Q14562 1220 aaKnown RBP21.21■□□□□ 0.99
VDR-204ENST00000547065 DNTTIP2Q5QJE6 756 aaKnown RBP21.21■□□□□ 0.99
VDR-204ENST00000547065 DACT2Q5SW24 774 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 EHD4Q9H223 541 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 HSD3B7Q9H2F3 369 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 KCNQ5Q9NR82 932 aa21.21■□□□□ 0.99
VDR-204ENST00000547065 hCG_1984214I3L0E3 225 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 CBFA2T2O43439 604 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 ECE2O60344 883 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 TPM2P07951 284 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 SHMT1P34896 483 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 IL17AQ16552 155 aa21.2■□□□□ 0.99
VDR-204ENST00000547065 SOGA3Q5TF21 947 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms