RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 PAGR1Q9BTK6 254 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 TANGO6Q9C0B7 1094 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 TCP11L1Q9NUJ3 509 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 LAMA4Q16363 1823 aa18.2■□□□□ 0.5
SSH1-204ENST00000546697 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 FLOT1O75955 427 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 NDUFB10O96000 172 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 TSPY3P0CV98 308 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 TSPY8P0CW00 308 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 CCL5P13501 91 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 ELNP15502 786 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 EN2P19622 333 aaPredicted RBP18.19■□□□□ 0.5
SSH1-204ENST00000546697 TFAP4Q01664 338 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
SSH1-204ENST00000546697 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 ZNF214Q9UL59 606 aaPredicted RBP18.19■□□□□ 0.5
SSH1-204ENST00000546697 RAD50Q92878 1312 aa18.19■□□□□ 0.5
SSH1-204ENST00000546697 VWA5AO00534 786 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 PLA2G6O60733 806 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 RGS2P41220 211 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 TRIB2Q92519 343 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 ATG4CQ96DT6 458 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 APBA2Q99767 749 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 CRISPLD2Q9H0B8 497 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 MROH8Q9H579 483 aa18.18■□□□□ 0.5
SSH1-204ENST00000546697 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
SSH1-204ENST00000546697 SLC25A27O95847 323 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 CTDSPL2Q05D32 466 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 FAM83BQ5T0W9 1011 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 RIOX2Q8IUF8 465 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 UNC93B1Q9H1C4 597 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 DIAPH3Q9NSV4 1193 aa18.17■□□□□ 0.5
SSH1-204ENST00000546697 SGPL1O95470 568 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 FDX1P10109 184 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 COPB2P35606 906 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 FAM47AQ5JRC9 791 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 AKNAD1Q5T1N1 836 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 CWC27Q6UX04 472 aaKnown RBP18.16■□□□□ 0.5
SSH1-204ENST00000546697 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
SSH1-204ENST00000546697 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 RPTORQ8N122 1335 aa18.16■□□□□ 0.5
SSH1-204ENST00000546697 COL11A1P12107 1806 aaPredicted RBP18.16■□□□□ 0.5
SSH1-204ENST00000546697 TSPY2A6NKD2 308 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 ERCC3P19447 782 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 ATP2B2Q01814 1243 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 U2AF1L4Q8WU68 220 aaKnown RBP18.15■□□□□ 0.5
SSH1-204ENST00000546697 SLF1Q9BQI6 1058 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 IL25Q9H293 177 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 INCENPQ9NQS7 918 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 FEM1BQ9UK73 627 aa18.15■□□□□ 0.5
SSH1-204ENST00000546697 OAZ1P54368 228 aa18.14■□□□□ 0.49
SSH1-204ENST00000546697 OLFML2BQ68BL8 750 aa18.14■□□□□ 0.49
SSH1-204ENST00000546697 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.49
SSH1-204ENST00000546697 TTC14Q96N46 770 aa18.14■□□□□ 0.49
SSH1-204ENST00000546697 RNF41Q9H4P4 317 aaPredicted RBP18.14■□□□□ 0.49
SSH1-204ENST00000546697 SLC38A10Q9HBR0 1119 aa18.14■□□□□ 0.49
SSH1-204ENST00000546697 CYP2B6P20813 491 aa18.13■□□□□ 0.49
SSH1-204ENST00000546697 CHMLP26374 656 aa18.13■□□□□ 0.49
SSH1-204ENST00000546697 RCSD1Q6JBY9 416 aa18.13■□□□□ 0.49
SSH1-204ENST00000546697 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
SSH1-204ENST00000546697 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
SSH1-204ENST00000546697 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.13■□□□□ 0.49
SSH1-204ENST00000546697 BIN2Q9UBW5 565 aaPredicted RBP18.13■□□□□ 0.49
SSH1-204ENST00000546697 IVNS1ABPQ9Y6Y0 642 aa18.13■□□□□ 0.49
SSH1-204ENST00000546697 ZNF213O14771 459 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 BMP3P12645 472 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
SSH1-204ENST00000546697 STAT3P40763 770 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 TRIM32Q13049 653 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 LRRC47Q8N1G4 583 aaKnown RBP18.12■□□□□ 0.49
SSH1-204ENST00000546697 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 ANKS1AQ92625 1134 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
SSH1-204ENST00000546697 TEX13BQ9BXU2 312 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
SSH1-204ENST00000546697 CTNNA3Q9UI47 895 aa18.12■□□□□ 0.49
SSH1-204ENST00000546697 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
SSH1-204ENST00000546697 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
SSH1-204ENST00000546697 NMT2O60551 498 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 ADORA2AP29274 412 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 CACNB2Q08289 660 aaPredicted RBP18.11■□□□□ 0.49
SSH1-204ENST00000546697 CCL14Q16627 93 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 BTNL9Q6UXG8 535 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
SSH1-204ENST00000546697 FLRT1Q9NZU1 646 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms