RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 BTBD7Q9P203 1132 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 RLFQ13129 1914 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 HAX1O00165 279 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 ZNF213O14771 459 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
YBX3-217ENST00000546164 SOX10P56693 466 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 HAND2P61296 217 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 FAM83BQ5T0W9 1011 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 SH3TC2Q8TF17 1288 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 CTNNA3Q9UI47 895 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 PPP1R9AQ9ULJ8 1098 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 DOCK3Q8IZD9 2030 aa14.05□□□□□ -0.16
YBX3-217ENST00000546164 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 SGSM2O43147 1006 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 ADCY3O60266 1144 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 NEFLP07196 543 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 GPR142Q7Z601 462 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 PLEKHH3Q7Z736 793 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 CCAR1Q8IX12 1150 aaKnown RBP14.04□□□□□ -0.16
YBX3-217ENST00000546164 LRRC47Q8N1G4 583 aaKnown RBP14.04□□□□□ -0.16
YBX3-217ENST00000546164 SHCBP1Q8NEM2 672 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 USP6NLQ92738 828 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 ATG4CQ96DT6 458 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 GMCL1Q96IK5 515 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 FBXO28Q9NVF7 368 aa14.04□□□□□ -0.16
YBX3-217ENST00000546164 XRCC5P13010 732 aaKnown RBP14.03□□□□□ -0.16
YBX3-217ENST00000546164 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
YBX3-217ENST00000546164 MORN1Q5T089 497 aa14.03□□□□□ -0.16
YBX3-217ENST00000546164 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
YBX3-217ENST00000546164 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
YBX3-217ENST00000546164 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
YBX3-217ENST00000546164 MOV10L1Q9BXT6 1211 aaKnown RBP14.03□□□□□ -0.16
YBX3-217ENST00000546164 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
YBX3-217ENST00000546164 STX8Q9UNK0 236 aa14.03□□□□□ -0.16
YBX3-217ENST00000546164 NEDD4P46934 1319 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 VWA5AO00534 786 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 RAD21O60216 631 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 NMT2O60551 498 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 CENPBP07199 599 aaPredicted RBP14.02□□□□□ -0.17
YBX3-217ENST00000546164 PTPREP23469 700 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 UBXN2AP68543 259 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.17
YBX3-217ENST00000546164 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 SLFN13Q68D06 897 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 REPS2Q8NFH8 660 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 ESR2Q92731 530 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 TTC14Q96N46 770 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
YBX3-217ENST00000546164 MKI67P46013 3256 aaKnown RBP14.02□□□□□ -0.17
YBX3-217ENST00000546164 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 SLC15A5A6NIM6 579 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 PLA2G6O60733 806 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 HOXC6P09630 235 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 BMP3P12645 472 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 ELNP15502 786 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 RGS2P41220 211 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 GRB14Q14449 540 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 TMEM132BQ14DG7 1078 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 TRMT44Q8IYL2 757 aaKnown RBP14.01□□□□□ -0.17
YBX3-217ENST00000546164 PRPF38AQ8NAV1 312 aaKnown RBP14.01□□□□□ -0.17
YBX3-217ENST00000546164 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 MROH8Q9H579 483 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 FEM1BQ9UK73 627 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 ZNF214Q9UL59 606 aaPredicted RBP14.01□□□□□ -0.17
YBX3-217ENST00000546164 MYH4Q9Y623 1939 aa14.01□□□□□ -0.17
YBX3-217ENST00000546164 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
YBX3-217ENST00000546164 PLXNB2O15031 1838 aa14□□□□□ -0.17
YBX3-217ENST00000546164 ATP2A1O14983 1001 aa14□□□□□ -0.17
YBX3-217ENST00000546164 STRNO43815 780 aa14□□□□□ -0.17
YBX3-217ENST00000546164 SLC25A27O95847 323 aa14□□□□□ -0.17
YBX3-217ENST00000546164 HMGCRP04035 888 aa14□□□□□ -0.17
YBX3-217ENST00000546164 INHAP05111 366 aa14□□□□□ -0.17
YBX3-217ENST00000546164 FDX1P10109 184 aa14□□□□□ -0.17
YBX3-217ENST00000546164 TOP1P11387 765 aaKnown RBP14□□□□□ -0.17
YBX3-217ENST00000546164 ERCC3P19447 782 aa14□□□□□ -0.17
YBX3-217ENST00000546164 COPB2P35606 906 aa14□□□□□ -0.17
YBX3-217ENST00000546164 MLLT1Q03111 559 aaPredicted RBP14□□□□□ -0.17
YBX3-217ENST00000546164 MAP2K5Q13163 448 aa14□□□□□ -0.17
YBX3-217ENST00000546164 MTFR1Q15390 333 aa14□□□□□ -0.17
YBX3-217ENST00000546164 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
YBX3-217ENST00000546164 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
YBX3-217ENST00000546164 SKAP1Q86WV1 359 aa14□□□□□ -0.17
YBX3-217ENST00000546164 RIOX2Q8IUF8 465 aa14□□□□□ -0.17
YBX3-217ENST00000546164 ABRAQ8N0Z2 381 aa14□□□□□ -0.17
YBX3-217ENST00000546164 APBA2Q99767 749 aa14□□□□□ -0.17
YBX3-217ENST00000546164 CNNM2Q9H8M5 875 aa14□□□□□ -0.17
YBX3-217ENST00000546164 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
YBX3-217ENST00000546164 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
YBX3-217ENST00000546164 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
YBX3-217ENST00000546164 GJB1P08034 283 aa13.99□□□□□ -0.17
YBX3-217ENST00000546164 CCL5P13501 91 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms