RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 CETPP11597 493 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 CPA1P15085 419 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 MAP2K2P36507 400 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 HMGCS2P54868 508 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 C12orf42Q96LP6 360 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 ARHGEF10LQ9HCE6 1279 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
LINC00939-203ENST00000545784 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
LINC00939-203ENST00000545784 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 ATP6V1DQ9Y5K8 247 aa12.07□□□□□ -0.48
LINC00939-203ENST00000545784 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 PDIA4P13667 645 aaKnown RBP12.06□□□□□ -0.48
LINC00939-203ENST00000545784 ATP2B2Q01814 1243 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 IQCA1Q86XH1 822 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
LINC00939-203ENST00000545784 TNKSO95271 1327 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 HMGB1P09429 215 aaKnown RBP12.06□□□□□ -0.48
LINC00939-203ENST00000545784 INHBEP58166 350 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 CCL15Q16663 113 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 SASS6Q6UVJ0 657 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 LY9Q9HBG7 655 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 STX8Q9UNK0 236 aa12.06□□□□□ -0.48
LINC00939-203ENST00000545784 R3HCC1Q9Y3T6 440 aaKnown RBP12.06□□□□□ -0.48
LINC00939-203ENST00000545784 PCNTO95613 3336 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 ATAD5Q96QE3 1844 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 BTBD19C9JJ37 291 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 F5H6K3 240 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 SH2B2O14492 632 aaPredicted RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 TOP1P11387 765 aaKnown RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 PSMA5P28066 241 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 USP14P54578 494 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 KLRC3Q07444 240 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 TREML2Q5T2D2 321 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 GMCL1P1Q8NEA9 526 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 UBAC1Q9BSL1 405 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 LRRC2Q9BYS8 371 aa12.05□□□□□ -0.48
LINC00939-203ENST00000545784 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
LINC00939-203ENST00000545784 PTMAP06454 111 aaKnown RBP12.04□□□□□ -0.48
LINC00939-203ENST00000545784 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
LINC00939-203ENST00000545784 RUFY3Q7L099 469 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
LINC00939-203ENST00000545784 FBXL16Q8N461 479 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 TCEANC2Q96MN5 208 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 FEZ1Q99689 392 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 NDUFB10O96000 172 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 VCAM1P19320 739 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
LINC00939-203ENST00000545784 LIFRP42702 1097 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 TMEM67Q5HYA8 995 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 BLOC1S2Q6QNY1 142 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 GADL1Q6ZQY3 521 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 ANKRD23Q86SG2 305 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 AGTPBP1Q9UPW5 1226 aa12.04□□□□□ -0.48
LINC00939-203ENST00000545784 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 UQCRHP07919 91 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 SREBF2Q12772 1141 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 CCDC183Q5T5S1 534 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
LINC00939-203ENST00000545784 LPAR1Q92633 364 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 GOPCQ9HD26 462 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 MYH8P13535 1937 aa12.03□□□□□ -0.48
LINC00939-203ENST00000545784 SNHG28P0DPA3 235 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.48
LINC00939-203ENST00000545784 WTAPQ15007 396 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 SART3Q15020 963 aaKnown RBP12.02□□□□□ -0.48
LINC00939-203ENST00000545784 SLFN13Q68D06 897 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 POTEEQ6S8J3 1075 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 CATSPERGQ6ZRH7 1159 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 GMCL1Q96IK5 515 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.48
LINC00939-203ENST00000545784 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.48
LINC00939-203ENST00000545784 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.48
LINC00939-203ENST00000545784 PDHXO00330 501 aa12.02□□□□□ -0.49
LINC00939-203ENST00000545784 UBE2HP62256 183 aa12.02□□□□□ -0.49
LINC00939-203ENST00000545784 Q6ZUG5 572 aa12.02□□□□□ -0.49
LINC00939-203ENST00000545784 TMTC2Q8N394 836 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms