RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CHMP4CQ96CF2 233 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 BRPF3Q9ULD4 1205 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
CDCA3-210ENST00000545368 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 EVCP57679 992 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 GRM4Q14833 912 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 KIAA1755Q5JYT7 1200 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 LARP6Q9BRS8 491 aaKnown RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
CDCA3-210ENST00000545368 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 WDR33Q9C0J8 1336 aaKnown RBP15.16■□□□□ 0.02
CDCA3-210ENST00000545368 NID2Q14112 1375 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L15C9J2P7 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L13C9JLJ4 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L11C9JVI0 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L18D6R9N7 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L22D6RA61 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L17D6RBQ6 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L19D6RCP7 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L20D6RJB6 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 RXRAP19793 462 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 GNAQP50148 359 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 STAT2P52630 851 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 USP17L24Q0WX57 530 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 RTN1Q16799 776 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 OTUD7BQ6GQQ9 843 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 ZSCAN31Q96LW9 406 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-210ENST00000545368 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-210ENST00000545368 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
CDCA3-210ENST00000545368 FEM1BQ9UK73 627 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
CDCA3-210ENST00000545368 THSD7BQ9C0I4 1608 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 TMEM232C9JQI7 657 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 OSBPP22059 807 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
CDCA3-210ENST00000545368 VEGFBP49765 207 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-210ENST00000545368 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-210ENST00000545368 STK3Q13188 491 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 MOGSQ13724 837 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 TREML2Q5T2D2 321 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 KCTD1Q719H9 257 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 FAM160B2Q86V87 743 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 SH2B1Q9NRF2 756 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-210ENST00000545368 MAD2L2Q9UI95 211 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 TPCN1Q9ULQ1 816 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
CDCA3-210ENST00000545368 PARP14Q460N5 1801 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 BTBD19C9JJ37 291 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 AOC2O75106 756 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 FLOT1O75955 427 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 GOLGA8HP0CJ92 632 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
CDCA3-210ENST00000545368 MAP2K2P36507 400 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 CATSPERGQ6ZRH7 1159 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 CHURC1Q8WUH1 139 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
CDCA3-210ENST00000545368 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
CDCA3-210ENST00000545368 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
CDCA3-210ENST00000545368 KLRF2D3W0D1 207 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 PDHXO00330 501 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 CPLX1O14810 134 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 DHX16O60231 1041 aaKnown RBP15.12■□□□□ 0.01
CDCA3-210ENST00000545368 PLA2G6O60733 806 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 PFKFB2O60825 505 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 TM4SF4P48230 202 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 CCT2P78371 535 aaKnown RBP15.12■□□□□ 0.01
CDCA3-210ENST00000545368 ME3Q16798 604 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 CPLX2Q6PUV4 134 aaKnown RBP15.12■□□□□ 0.01
CDCA3-210ENST00000545368 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
CDCA3-210ENST00000545368 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 STAG2Q8N3U4 1231 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 SLF1Q9BQI6 1058 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 MYPNQ86TC9 1320 aa15.12■□□□□ 0.01
CDCA3-210ENST00000545368 IGF2BP3O00425 579 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDCA3-210ENST00000545368 CD2BP2O95400 341 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms