RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 SWAP70Q9UH65 585 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 CNTNAP5Q8WYK1 1306 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 SMIM22K7EJ46 135 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 PPIP5K2O43314 1243 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 DTNBO60941 627 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 GADD45BO75293 160 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 LETM1O95202 739 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 YEATS4O95619 227 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 HLA-DOAP06340 250 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TSPY3P0CV98 308 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TSPY8P0CW00 308 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 XBP1P17861 261 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 RASA1P20936 1047 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 POLD1P28340 1107 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 KIF5BP33176 963 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CLCN1P35523 988 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 GGCXP38435 758 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CRKP46108 304 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CDK8P49336 464 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 MRE11P49959 708 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TGFB2P61812 414 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 AKAP17AQ02040 695 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TROAPQ12815 778 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 AOC3Q16853 763 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 KRT40Q6A162 431 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TMTC3Q6ZXV5 915 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC144CPQ8IYA2 1237 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 ZNF444Q8N0Y2 327 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CRACR2BQ8N4Y2 399 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 KRI1Q8N9T8 703 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 CTCFLQ8NI51 663 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 PHKBQ93100 1093 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 PHOX2BQ99453 314 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 EHD4Q9H223 541 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 KAT14Q9H8E8 782 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 POLR3EQ9NVU0 708 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 TMEM63CQ9P1W3 806 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 SAP30BPQ9UHR5 308 aaKnown RBP6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 SERPINA10Q9UK55 444 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 FER1L6Q2WGJ9 1857 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 SIPA1L1O43166 1804 aa6.32□□□□□ -1.4
NPIPB3-214ENST00000545358 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 F8W031 263 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 PRPF3O43395 683 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 C21orf2O43822 256 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 NR1I2O75469 434 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 WDHD1O75717 1129 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 MMP1P03956 469 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 DPEP1P16444 411 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 U2AF2P26368 475 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 NOVP48745 357 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 NASPP49321 788 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GNAQP50148 359 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 PLCD1P51178 756 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 TFAP4Q01664 338 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GABPAQ06546 454 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 FUT2Q10981 343 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GNL2Q13823 731 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GRM4Q14833 912 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 SAFBQ15424 915 aaKnown RBP eCLIP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 FAM47AQ5JRC9 791 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 MYSM1Q5VVJ2 828 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 APOBEC3HQ6NTF7 200 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 FAM173BQ6P4H8 233 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 FAM177A1Q8N128 213 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 PNMA1Q8ND90 353 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 KCNG4Q8TDN1 519 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 DYNLL2Q96FJ2 89 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 IDI2Q9BXS1 227 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 OSBPL5Q9H0X9 879 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 GPCPD1Q9NPB8 672 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 DDX19AQ9NUU7 478 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 RTEL1Q9NZ71 1219 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 ATRNL1Q5VV63 1379 aa6.31□□□□□ -1.4
NPIPB3-214ENST00000545358 COL4A5P29400 1685 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 ARFGEF1Q9Y6D6 1849 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 YDJCA8MPS7 323 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 KIF28PB7ZC32 967 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 PPFIA3O75145 1194 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 PLEKHA8P1O95397 391 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 KCNA3P22001 575 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 SCNN1DP51172 638 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 COPS2P61201 443 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 PICALMQ13492 652 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 SLC4A8Q2Y0W8 1093 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 CDC42EP5Q6NZY7 148 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 RSBN1LQ6PCB5 846 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 JMYQ8N9B5 988 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms