RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SLITRK5O94991 958 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 BPNT1O95861 308 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 GLI1P08151 1106 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 RAP1GAPP47736 663 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 DDR2Q16832 855 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 RUFY4Q6ZNE9 571 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 C22orf34Q6ZV56 151 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 CYFIP1Q7L576 1253 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 OR6P1Q8NGX9 317 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 HSPA12BQ96MM6 686 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 CRBNQ96SW2 442 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 PPP1R16BQ96T49 567 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 DNAJC7Q99615 494 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 CARS2Q9HA77 564 aaKnown RBP5.93□□□□□ -1.46
SNHG1-222ENST00000545308 PCDHB14Q9Y5E9 798 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
SNHG1-222ENST00000545308 PRR33A8MZF0 331 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 ATE1O95260 518 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 TSPAN15O95858 294 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 ZNF865P0CJ78 1059 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-222ENST00000545308 INPP5AQ14642 412 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 KIRREL1Q96J84 757 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 TOX2Q96NM4 488 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 ANTXR1Q9H6X2 564 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 ATP13A1Q9HD20 1204 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 C19orf73Q9NVV2 129 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 CNTNAP4Q9C0A0 1308 aa5.92□□□□□ -1.46
SNHG1-222ENST00000545308 PRAMEF27A3QJZ7 478 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 FAM155AB1AL88 458 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-222ENST00000545308 GFRA2O00451 464 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 PDPK1O15530 556 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 IMPDH2P12268 514 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 CFPP27918 469 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 GDNFP39905 211 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 CAP2P40123 477 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 CASP7P55210 303 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 SLBPQ14493 270 aaKnown RBP eCLIP5.91□□□□□ -1.462e-8■□□□□ 9.6
SNHG1-222ENST00000545308 TMEM67Q5HYA8 995 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 SFRP5Q5T4F7 317 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 CDKAL1Q5VV42 579 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 LRFN4Q6PJG9 635 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 PRR23BQ6ZRT6 265 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 MFSD4AQ8N468 514 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 FBRSQ9HAH7 460 aa5.91□□□□□ -1.46
SNHG1-222ENST00000545308 TPX2Q9ULW0 747 aaKnown RBP5.91□□□□□ -1.46
SNHG1-222ENST00000545308 RASGRF1Q13972 1273 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 PLEKHG4Q58EX7 1191 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
SNHG1-222ENST00000545308 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 SYDE1Q6ZW31 735 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-222ENST00000545308 HDXQ7Z353 690 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 C1QL4Q86Z23 238 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 MFSD2AQ8NA29 543 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 MIPEPQ99797 713 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 WNT10AQ9GZT5 417 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 ST14Q9Y5Y6 855 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 CAPN6Q9Y6Q1 641 aa5.9□□□□□ -1.46
SNHG1-222ENST00000545308 PRR36Q9H6K5 1346 aa5.9□□□□□ -1.47
SNHG1-222ENST00000545308 A0A1W2PQH9 124 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 B2RBV5 119 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 H3BS24 57 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 GJB6O95452 261 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 PPP2R5EQ16537 467 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 FXNQ16595 210 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 NKG7Q16617 165 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 PTPROQ16827 1216 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 C19orf47Q8N9M1 422 aaKnown RBP5.89□□□□□ -1.47
SNHG1-222ENST00000545308 PLPPR2Q96GM1 343 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 CORINQ9Y5Q5 1042 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 SNCAIPQ9Y6H5 919 aa5.89□□□□□ -1.47
SNHG1-222ENST00000545308 MEIS3P2A8K0S8 358 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 UPK3BL1B0FP48 263 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 UPK3BL2E5RIL1 263 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 CLSTN1O94985 981 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 HTR3BO95264 441 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 SQSTM1Q13501 440 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 WIPI1Q5MNZ9 446 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-222ENST00000545308 DIEXFQ68CQ4 756 aaKnown RBP5.88□□□□□ -1.47
SNHG1-222ENST00000545308 THAP5Q7Z6K1 395 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 ANKLE2Q86XL3 938 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 HID1Q8IV36 788 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 RIN3Q8TB24 985 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 ZSCAN18Q8TBC5 510 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-222ENST00000545308 CCDC120Q96HB5 630 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
SNHG1-222ENST00000545308 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SNHG1-222ENST00000545308 DNAJA2O60884 412 aa5.87□□□□□ -1.47
SNHG1-222ENST00000545308 CDC45O75419 566 aa5.87□□□□□ -1.47
SNHG1-222ENST00000545308 KRT1P04264 644 aa5.87□□□□□ -1.47
SNHG1-222ENST00000545308 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
SNHG1-222ENST00000545308 IFRD2Q12894 506 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-222ENST00000545308 MRM1Q6IN84 353 aaKnown RBP5.87□□□□□ -1.47
SNHG1-222ENST00000545308 LETMD1Q6P1Q0 360 aa5.87□□□□□ -1.47
SNHG1-222ENST00000545308 C6orf15Q6UXA7 325 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms