RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 ZKSCAN4Q969J2 545 aaPredicted RBP8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 TRIM44Q96DX7 344 aaPredicted RBP8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 ZNF341Q9BYN7 854 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 ORC3Q9UBD5 711 aaPredicted RBP8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 SYNPO2Q9UMS6 1093 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 TMX2Q9Y320 296 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 SNCAIPQ9Y6H5 919 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 PTPRFP10586 1907 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 hCG_1642624A0A1W2PR95 340 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 TRAF5O00463 557 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 ASNSP08243 561 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 HMGN5P82970 282 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 ZSCAN23Q3MJ62 389 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 TTBK2Q6IQ55 1244 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 MOB2Q70IA6 237 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 PNMA8AQ86V59 439 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 SULF1Q8IWU6 871 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 SCYL3Q8IZE3 742 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 MTMR8Q96EF0 704 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 GMCL1Q96IK5 515 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 MYH6P13533 1939 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 F5H6K3 240 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 PRPF3O43395 683 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 DHX16O60231 1041 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 PPP1R11O60927 126 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 PTPRAP18433 802 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 KLRC3Q07444 240 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 RLFQ13129 1914 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 DGKZQ13574 1117 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 MAP3K11Q16584 847 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 PARP14Q460N5 1801 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 DCAF15Q66K64 600 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 FRMPD2Q68DX3 1309 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 CAVIN1Q6NZI2 390 aaKnown RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 LRSAM1Q6UWE0 723 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 SYNE3Q6ZMZ3 975 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 CTCFLQ8NI51 663 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 NUP88Q99567 741 aaPredicted RBP8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 SPZ1Q9BXG8 430 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 SLC26A6Q9BXS9 759 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 RIOX1Q9H6W3 641 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 GINM1Q9NU53 330 aa8.11□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC196A0A1B0GTZ2 297 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 KLRF2D3W0D1 207 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 CPLX1O14810 134 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 RESTQ13127 1097 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 VGLL4Q14135 290 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 SUPT20HL1Q3ZLR7 823 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 ASPRV1Q53RT3 343 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 HS1BP3Q53T59 392 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 SLFN13Q68D06 897 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 CLMNQ96JQ2 1002 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 UBA5Q9GZZ9 404 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 VCPKMTQ9H867 229 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 CABP5Q9NP86 173 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 MTMR7Q9Y216 660 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 TCHHQ07283 1943 aa8.1□□□□□ -1.11
HMGCS2-204ENST00000544913 KIF28PB7ZC32 967 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 CDKL5O76039 1030 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 F13A1P00488 732 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 PARP1P09874 1014 aaKnown RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 SMARCA1P28370 1054 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 KIF5BP33176 963 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 UBE2HP62256 183 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 ATP2B2Q01814 1243 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 PFKFB3Q16875 520 aaPredicted RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 LARP1BQ659C4 914 aaKnown RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 BTNL9Q6UXG8 535 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 GAS2L3Q86XJ1 694 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 SPICE1Q8N0Z3 855 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 FAM184AQ8NB25 1140 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 RGS22Q8NE09 1264 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 GPT2Q8TD30 523 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 DCAF4Q8WV16 495 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 KIAA1683Q9H0B3 1180 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 JMJD4Q9H9V9 463 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 EMILIN3Q9NT22 766 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 DEXIO95424 95 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 SLC16A2P36021 539 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 FOSBP53539 338 aa8.09□□□□□ -1.11
HMGCS2-204ENST00000544913 GUCY1B3Q02153 619 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms