RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZMYND8Q9ULU4 1186 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-209ENST00000544610 CEP290O15078 2479 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 CDK5RAP2Q96SN8 1893 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 SGSM2O43147 1006 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 PEX10O60683 326 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 GDF11O95390 407 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 HLA-DOAP06340 250 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 COL6A1P12109 1028 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 ZKSCAN1P17029 563 aaPredicted RBP7.84□□□□□ -1.15
CDCA3-209ENST00000544610 RBM25P49756 843 aaKnown RBP7.84□□□□□ -1.15
CDCA3-209ENST00000544610 NT5C2P49902 561 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 ANAPC15P60006 121 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 ERVK-9P63128 1117 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 ERVK-24P63145 666 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 LRIT3Q3SXY7 679 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 POTEEQ6S8J3 1075 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 GPR142Q7Z601 462 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
CDCA3-209ENST00000544610 C12orf42Q96LP6 360 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 APBA2Q99767 749 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 ESYT1Q9BSJ8 1104 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 TRIM34Q9BYJ4 488 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 FAM117AQ9C073 453 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 PORCNQ9H237 461 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 BOLA2Q9H3K6 86 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 DIAPH3Q9NSV4 1193 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 EMILIN3Q9NT22 766 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 PALD1Q9ULE6 856 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 UNC80Q8N2C7 3258 aa7.84□□□□□ -1.15
CDCA3-209ENST00000544610 SYN1P17600 705 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 RGS2P41220 211 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 MAGEA10P43363 369 aaPredicted RBP7.83□□□□□ -1.16
CDCA3-209ENST00000544610 ZAP70P43403 619 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 CACNB2Q08289 660 aaPredicted RBP7.83□□□□□ -1.16
CDCA3-209ENST00000544610 MAP3K12Q12852 859 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 Q3C1V9 767 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 MORN1Q5T089 497 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 TATDN1Q6P1N9 297 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 PLEKHH3Q7Z736 793 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 SKAP1Q86WV1 359 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 TDHQ8IZJ6 230 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 SLC17A8Q8NDX2 589 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 APPBP2Q92624 585 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 RILPL2Q969X0 211 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 FSD1Q9BTV5 496 aa7.83□□□□□ -1.16
CDCA3-209ENST00000544610 PIH1D3Q9NQM4 214 aaKnown RBP7.83□□□□□ -1.16
CDCA3-209ENST00000544610 SAP30BPQ9UHR5 308 aaKnown RBP7.83□□□□□ -1.16
CDCA3-209ENST00000544610 DNAH12Q6ZR08 3092 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 ZMYM6O95789 1325 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 DLL1O00548 723 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 RNF113AO15541 343 aaKnown RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 CNMDO75829 334 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 GH2P01242 217 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 GNAT2P19087 354 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 CCND3P30281 292 aaPredicted RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 DYNLL1P63167 89 aaKnown RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 CCL14Q16627 93 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 MCMDC2Q4G0Z9 681 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 CCAR1Q8IX12 1150 aaKnown RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 TBC1D32Q96NH3 1257 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 PAGR1Q9BTK6 254 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 EHD4Q9H223 541 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 GPHNQ9NQX3 736 aaPredicted RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 RABGAP1Q9Y3P9 1069 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 LAMA2P24043 3122 aaKnown RBP7.82□□□□□ -1.16
CDCA3-209ENST00000544610 A0A0C4DFX4 3053 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 MYH7P12883 1935 aa7.82□□□□□ -1.16
CDCA3-209ENST00000544610 DOCK3Q8IZD9 2030 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 EYSQ5T1H1 3165 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 GOLIM4O00461 696 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
CDCA3-209ENST00000544610 VCAM1P19320 739 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 CYP7A1P22680 504 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 MCCP23508 829 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 ADD2P35612 726 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP14P54578 494 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 CCNA1P78396 465 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 MAP2K5Q13163 448 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 GRB14Q14449 540 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 LRRC26Q2I0M4 334 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 TSGA10IPQ3SY00 556 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 TSHZ3Q63HK5 1081 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 GIMAP6Q6P9H5 292 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 LBX2Q6XYB7 198 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 KIAA1211Q6ZU35 1233 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 MIGA1Q8NAN2 632 aa7.81□□□□□ -1.16
CDCA3-209ENST00000544610 KCNB2Q92953 911 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms