RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TSPY2A6NKD2 308 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 STRNO43815 780 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 ORC4O43929 436 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 PCP11498 1178 aaKnown RBP27.58■■■□□ 2.01
CHFR-222ENST00000544093 CYP2B6P20813 491 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 APBA2Q99767 749 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 ADAMTS5Q9UNA0 930 aa27.58■■■□□ 2.01
CHFR-222ENST00000544093 MKI67P46013 3256 aaKnown RBP27.57■■■□□ 2
CHFR-222ENST00000544093 FGRP09769 529 aa27.57■■■□□ 2
CHFR-222ENST00000544093 PTPREP23469 700 aa27.57■■■□□ 2
CHFR-222ENST00000544093 CTDSPL2Q05D32 466 aa27.57■■■□□ 2
CHFR-222ENST00000544093 FAM83BQ5T0W9 1011 aa27.57■■■□□ 2
CHFR-222ENST00000544093 CWC27Q6UX04 472 aaKnown RBP27.57■■■□□ 2
CHFR-222ENST00000544093 GMCL1P1Q8NEA9 526 aa27.57■■■□□ 2
CHFR-222ENST00000544093 ATG4CQ96DT6 458 aa27.57■■■□□ 2
CHFR-222ENST00000544093 MOV10L1Q9BXT6 1211 aaKnown RBP27.57■■■□□ 2
CHFR-222ENST00000544093 UNC93B1Q9H1C4 597 aa27.57■■■□□ 2
CHFR-222ENST00000544093 MROH8Q9H579 483 aa27.57■■■□□ 2
CHFR-222ENST00000544093 PPP1R9AQ9ULJ8 1098 aa27.57■■■□□ 2
CHFR-222ENST00000544093 NDUFB10O96000 172 aa27.56■■■□□ 2
CHFR-222ENST00000544093 ZKSCAN1P17029 563 aaPredicted RBP27.56■■■□□ 2
CHFR-222ENST00000544093 PDE4AP27815 886 aa27.56■■■□□ 2
CHFR-222ENST00000544093 NT5C2P49902 561 aa27.56■■■□□ 2
CHFR-222ENST00000544093 MAP2K5Q13163 448 aa27.56■■■□□ 2
CHFR-222ENST00000544093 FAM47AQ5JRC9 791 aa27.56■■■□□ 2
CHFR-222ENST00000544093 TTC22Q5TAA0 569 aa27.56■■■□□ 2
CHFR-222ENST00000544093 PAK6Q9NQU5 681 aaPredicted RBP27.56■■■□□ 2
CHFR-222ENST00000544093 ZNF236Q9UL36 1845 aa27.55■■■□□ 2
CHFR-222ENST00000544093 GRB14Q14449 540 aa27.55■■■□□ 2
CHFR-222ENST00000544093 TRIB2Q92519 343 aa27.55■■■□□ 2
CHFR-222ENST00000544093 SLF1Q9BQI6 1058 aa27.55■■■□□ 2
CHFR-222ENST00000544093 RPTORQ8N122 1335 aa27.55■■■□□ 2
CHFR-222ENST00000544093 RANBP6O60518 1105 aaKnown RBP27.54■■■□□ 2
CHFR-222ENST00000544093 SLC25A27O95847 323 aa27.54■■■□□ 2
CHFR-222ENST00000544093 COL11A1P12107 1806 aaPredicted RBP27.54■■■□□ 2
CHFR-222ENST00000544093 COPB2P35606 906 aa27.54■■■□□ 2
CHFR-222ENST00000544093 PLS1Q14651 629 aa27.54■■■□□ 2
CHFR-222ENST00000544093 U2AF1L4Q8WU68 220 aaKnown RBP27.54■■■□□ 2
CHFR-222ENST00000544093 HMX1Q9NP08 348 aaPredicted RBP27.54■■■□□ 2
CHFR-222ENST00000544093 VWA5AO00534 786 aa27.53■■■□□ 2
CHFR-222ENST00000544093 SGPL1O95470 568 aa27.53■■■□□ 2
CHFR-222ENST00000544093 HOXC6P09630 235 aa27.53■■■□□ 2
CHFR-222ENST00000544093 ABRAQ8N0Z2 381 aa27.53■■■□□ 2
CHFR-222ENST00000544093 PRPF38AQ8NAV1 312 aaKnown RBP27.53■■■□□ 2
CHFR-222ENST00000544093 RNF41Q9H4P4 317 aaPredicted RBP27.53■■■□□ 2
CHFR-222ENST00000544093 FBXO28Q9NVF7 368 aa27.53■■■□□ 2
CHFR-222ENST00000544093 ERCC3P19447 782 aa27.52■■■□□ 2
CHFR-222ENST00000544093 SAMD1Q6SPF0 538 aaPredicted RBP27.52■■■□□ 2
CHFR-222ENST00000544093 SHISA4Q96DD7 197 aa27.52■■■□□ 2
CHFR-222ENST00000544093 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.52■■■□□ 2
CHFR-222ENST00000544093 TOMM22Q9NS69 142 aa27.52■■■□□ 2
CHFR-222ENST00000544093 SLC5A4Q9NY91 659 aa27.52■■■□□ 2
CHFR-222ENST00000544093 FEM1BQ9UK73 627 aa27.52■■■□□ 2
CHFR-222ENST00000544093 STX8Q9UNK0 236 aa27.52■■■□□ 2
CHFR-222ENST00000544093 TMEM132BQ14DG7 1078 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 MAP3K21Q5TCX8 1036 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 MFSD6Q6ZSS7 791 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 LRRC47Q8N1G4 583 aaKnown RBP27.51■■□□□ 1.99
CHFR-222ENST00000544093 DEFB118Q96PH6 123 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 DSCC1Q9BVC3 393 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 LAMA4Q16363 1823 aa27.51■■□□□ 1.99
CHFR-222ENST00000544093 RAD50Q92878 1312 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 GSPT1P15170 499 aaKnown RBP27.5■■□□□ 1.99
CHFR-222ENST00000544093 AKNAD1Q5T1N1 836 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 SLFN13Q68D06 897 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 NCAPG2Q86XI2 1143 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 RIOX2Q8IUF8 465 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 STAG1Q8WVM7 1258 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 GMCL1Q96IK5 515 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 NUP88Q99567 741 aaPredicted RBP27.5■■□□□ 1.99
CHFR-222ENST00000544093 CTNNA3Q9UI47 895 aa27.5■■□□□ 1.99
CHFR-222ENST00000544093 ZNF213O14771 459 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 FDX1P10109 184 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 BMP3P12645 472 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 PRKAR2AP13861 404 aaKnown RBP27.49■■□□□ 1.99
CHFR-222ENST00000544093 STAT3P40763 770 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 NOVP48745 357 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 DPP9Q86TI2 863 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 RUFY2Q8WXA3 655 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 IL17RBQ9NRM6 502 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 TCP11L1Q9NUJ3 509 aa27.49■■□□□ 1.99
CHFR-222ENST00000544093 ZNF214Q9UL59 606 aaPredicted RBP27.49■■□□□ 1.99
CHFR-222ENST00000544093 TFRCP02786 760 aaKnown RBP27.48■■□□□ 1.99
CHFR-222ENST00000544093 FCER1AP12319 257 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 ADORA2AP29274 412 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 PRPF38BQ5VTL8 546 aaKnown RBP27.48■■□□□ 1.99
CHFR-222ENST00000544093 MFSD14CQ5VZR4 134 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 TEX13BQ9BXU2 312 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 CRISPLD2Q9H0B8 497 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 INCENPQ9NQS7 918 aa27.48■■□□□ 1.99
CHFR-222ENST00000544093 CTDP1Q9Y5B0 961 aaPredicted RBP27.48■■□□□ 1.99
CHFR-222ENST00000544093 ZBED4O75132 1171 aa27.47■■□□□ 1.99
CHFR-222ENST00000544093 SLC1A4P43007 532 aa27.47■■□□□ 1.99
CHFR-222ENST00000544093 HAND2P61296 217 aa27.47■■□□□ 1.99
CHFR-222ENST00000544093 RRP12Q5JTH9 1297 aaKnown RBP27.47■■□□□ 1.99
CHFR-222ENST00000544093 REPS2Q8NFH8 660 aa27.47■■□□□ 1.99
CHFR-222ENST00000544093 ATP2A1O14983 1001 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 TRIM32Q13049 653 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 CCL14Q16627 93 aa27.46■■□□□ 1.99
CHFR-222ENST00000544093 FAM160B2Q86V87 743 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms