RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KRT26Q7Z3Y9 468 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 CCDC50Q8IVM0 306 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 OTUD6BQ8N6M0 293 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 ADD3Q9UEY8 706 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 ATP6V0A2Q9Y487 856 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 POLR2DO15514 142 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 GDF11O95390 407 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 SNX16P57768 344 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 CABP7Q86V35 215 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 ZBTB8OSQ8IWT0 167 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 TTLL11Q8NHH1 800 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 ARHGEF1Q92888 912 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 KCNQ2O43526 872 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 NR1I2O75469 434 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 DDAH1O94760 285 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 TTLL1O95922 423 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 FOSP01100 380 aaPredicted RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 TMOD1P28289 359 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 DYMQ7RTS9 669 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 BLIDQ8IZY5 108 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 MYO3BQ8WXR4 1341 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 RNF34Q969K3 372 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 IWS1Q96ST2 819 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 NOC4LQ9BVI4 516 aaKnown RBP7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
SRGAP1-206ENST00000543397 TMEM110-MUSTN1A8MSY1 372 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT86O43790 486 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 GCNT3O95395 438 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT19P08727 400 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ATXN8OSP0DMR3 200 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ATICP31939 592 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MRPS9P82933 396 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MYL5Q02045 173 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 EP400NLQ6ZTU2 488 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ADPGKQ9BRR6 497 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 AP5M1Q9H0R1 490 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MRPL44Q9H9J2 332 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 PRKAG2Q9UGJ0 569 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 KDM3AQ9Y4C1 1321 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 POLA2Q14181 598 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 DIXDC1Q155Q3 683 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 HLFQ16534 295 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ZNF710Q8N1W2 664 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 CSGALNACT2Q8N6G5 542 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 PCDHA12Q9UN75 941 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 SCG2P13521 617 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 TBC1D8BQ0IIM8 1120 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 UQCRHLA0A096LP55 91 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 UQCRHP07919 91 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ASPRV1Q53RT3 343 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MIGA2Q7L4E1 593 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 PODNQ7Z5L7 613 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 PLA2G4DQ86XP0 818 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 CMTR1Q8N1G2 835 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 TSC1Q92574 1164 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 PNMA3Q9UL41 463 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MAPK8IP1Q9UQF2 711 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MED23Q9ULK4 1368 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ATP2A1O14983 1001 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 DYNLL1P63167 89 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 MAP2K1Q02750 393 aaPredicted RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 CKAP4Q07065 602 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 UTP14CQ5TAP6 766 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 GALNT17Q6IS24 598 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 GSTA5Q7RTV2 222 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ARL10Q8N8L6 244 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 ADGRB3O60242 1522 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 C1orf167Q5SNV9 1468 aa7.67□□□□□ -1.18
SRGAP1-206ENST00000543397 POTEB2H3BUK9 544 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 SKILP12757 684 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 TCF3P15923 654 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 XKR9Q5GH70 373 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 NEK8Q86SG6 692 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 SLFN12Q8IYM2 578 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 CTNND2Q9UQB3 1225 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 CD19P15391 556 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 R3HDM1Q15032 1099 aaKnown RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 PPP2R5AQ15172 486 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 TBC1D10BQ4KMP7 808 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 VWA3BQ502W6 1294 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 FOXP4Q8IVH2 680 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 TEKT3Q9BXF9 490 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 NRBP2Q9NSY0 501 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 RASAL2Q9UJF2 1139 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 SORBS3O60504 671 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 JAK2O60674 1132 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 BMP3P12645 472 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 MFSD4BQ5TF39 518 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 FAM160B1Q5W0V3 765 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ACRBPQ8NEB7 543 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 FAM193BQ96PV7 902 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 CPSF1Q10570 1443 aaKnown RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ASNSP08243 561 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms