RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 FEZ1Q99689 392 aa12.5□□□□□ -0.41
NPIPB3-210ENST00000542817 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
NPIPB3-210ENST00000542817 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
NPIPB3-210ENST00000542817 KLF18A0A0U1RQI7 1052 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 WDR46O15213 610 aaKnown RBP12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 DDAH1O94760 285 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 CETPP11597 493 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 CDC27P30260 824 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 NOGQ13253 232 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 ME3Q16798 604 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 CATSPERGQ6ZRH7 1159 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 KCTD1Q719H9 257 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 SH2D4AQ9H788 454 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 AGTPBP1Q9UPW5 1226 aa12.49□□□□□ -0.41
NPIPB3-210ENST00000542817 CENPFP49454 3210 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 FRMPD2Q68DX3 1309 aaPredicted RBP12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 ERICH2A1L162 156 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 MANSC4A6NHS7 340 aaPredicted RBP12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 CYTH3O43739 400 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 PLA2G6O60733 806 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 RCAN1P53805 252 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 NTRK3Q16288 839 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 GADL1Q6ZQY3 521 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 FASTKD5Q7L8L6 764 aaKnown RBP12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 ANKRD23Q86SG2 305 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 FANCBQ8NB91 859 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 ZNF274Q96GC6 653 aaPredicted RBP12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 MTMR7Q9Y216 660 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
NPIPB3-210ENST00000542817 ADGRA2Q96PE1 1338 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 PFKFB2O60825 505 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 DTNBO60941 627 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 BMP3P12645 472 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 MAP2K2P36507 400 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 SLC1A4P43007 532 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 SCRN1Q12765 414 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 GRM1Q13255 1194 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 CCDC144CPQ8IYA2 1237 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 NCOA5Q9HCD5 579 aaKnown RBP12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 SLC45A1Q9Y2W3 748 aa12.47□□□□□ -0.41
NPIPB3-210ENST00000542817 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 GOLGA8BA8MQT2 603 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 PDHXO00330 501 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 ZBTB43O43298 467 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 PEX10O60683 326 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 CNMDO75829 334 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 CYP2C8P10632 490 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 SLC16A2P36021 539 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 ANKRD1Q15327 319 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 NOL8Q76FK4 1167 aaKnown RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 CMTR1Q8N1G2 835 aaKnown RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 NECAB1Q8N987 351 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 NUP133Q8WUM0 1156 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 SNX21Q969T3 373 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 MTMR8Q96EF0 704 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 UBA5Q9GZZ9 404 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
NPIPB3-210ENST00000542817 RAD21O60216 631 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 DSG3P32926 999 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 INHBEP58166 350 aa12.45□□□□□ -0.42
NPIPB3-210ENST00000542817 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms