RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 FERP16591 822 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 GRNP28799 593 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 TPP2P29144 1249 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 CDC25BP30305 580 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ARHGAP25P42331 645 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 RHBDL3P58872 404 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ROR2Q01974 943 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 IFFO1Q0D2I5 559 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 SCRN1Q12765 414 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 DYNC1I2Q13409 638 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 DRP2Q13474 957 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 LAMB3Q13751 1172 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 CCINQ13939 588 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 DCTN1Q14203 1278 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 SMC1AQ14683 1233 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 LRRC23Q53EV4 343 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 C20orf194Q5TEA3 1177 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 CDCA2Q69YH5 1023 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 PPIP5K1Q6PFW1 1433 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 C16orf87Q6PH81 154 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 YTHDF3Q7Z739 585 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 RSPH3Q86UC2 560 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 IQCA1Q86XH1 822 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 LRRC49Q8IUZ0 686 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 TRIM22Q8IYM9 498 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 RNF168Q8IYW5 571 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC155Q8N6L0 562 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ERMNQ8TAM6 284 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 EZH1Q92800 747 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 TRIM47Q96LD4 638 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ALS2CR12Q96Q35 445 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 SETDB2Q96T68 719 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 MOV10L1Q9BXT6 1211 aaKnown RBP4.93□□□□□ -1.62
SNHG1-219ENST00000542112 RETREG1Q9H6L5 497 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ATP6V0A4Q9HBG4 840 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 NLRP2Q9NX02 1062 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 TMEM63CQ9P1W3 806 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 DKK3Q9UBP4 350 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ADAM21Q9UKJ8 722 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 AK5Q9Y6K8 562 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ARAP3Q8WWN8 1544 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 MAST1Q9Y2H9 1570 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 HFM1A2PYH4 1435 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 ABCC5O15440 1437 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 NAIPQ13075 1403 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 ERICH2A1L162 156 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 EFCAB8A8MWE9 144 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 KHNYNO15037 678 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 TIMM44O43615 452 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 KRT38O76015 456 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 MSL3P1P0C860 447 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 ZFXP17010 805 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 EIF4BP23588 611 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 OAS2P29728 719 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 LMAN1P49257 510 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 TNP2Q05952 138 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC15Q0P6D6 951 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 FOXD4Q12950 439 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 PABPC4Q13310 644 aaKnown RBP eCLIP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 PTPN14Q15678 1187 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 CLPPQ16740 277 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.92□□□□□ -1.622e-12■■□□□ 11.6
SNHG1-219ENST00000542112 CCDC92Q53HC0 331 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 RRP12Q5JTH9 1297 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 LRRC31Q6UY01 552 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 ARHGAP22Q7Z5H3 698 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 REXO1L1PQ8IX06 675 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 GALNT12Q8IXK2 581 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 AFAP1Q8N556 730 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 TMEM87AQ8NBN3 555 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC150Q8NCX0 1101 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 OR8K1Q8NGG5 319 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 MORC4Q8TE76 937 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 HNRNPLLQ8WVV9 542 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 THOC1Q96FV9 657 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 FAM161BQ96MY7 647 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 FMNL2Q96PY5 1086 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 GSX2Q9BZM3 304 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 SRCIN1Q9C0H9 1055 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 BHMT2Q9H2M3 363 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 METTL5Q9NRN9 209 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 SPATA7Q9P0W8 599 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 DDX25Q9UHL0 483 aaKnown RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 GGA2Q9UJY4 613 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 FAN1Q9Y2M0 1017 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 TMEM98Q9Y2Y6 226 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 DENND4BO75064 1496 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-219ENST00000542112 ADGRL2O95490 1459 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 KIF7Q2M1P5 1343 aa4.92□□□□□ -1.62
SNHG1-219ENST00000542112 KIF13AQ9H1H9 1805 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 SOBPA7XYQ1 873 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 KIF3BO15066 747 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 SRGAP3O43295 1099 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ZBED4O75132 1171 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 FSBPO95073 299 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 ECEL1O95672 775 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 THBS1P07996 1170 aa4.91□□□□□ -1.62
SNHG1-219ENST00000542112 VIL1P09327 827 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 MAPTP10636 758 aaKnown RBP4.91□□□□□ -1.62
SNHG1-219ENST00000542112 KCNA2P16389 499 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms