RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 LRRC31Q6UY01 552 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 LEKR1Q6ZMV7 388 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 IFNL3Q8IZI9 196 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 CMTR1Q8N1G2 835 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.36□□□□□ -0.75
THBS3-211ENST00000541990 EIF3CQ99613 913 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 ALG1Q9BT22 464 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 ZNF213O14771 459 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 KRT40Q6A162 431 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 DPP8Q6V1X1 898 aaPredicted RBP10.35□□□□□ -0.75
THBS3-211ENST00000541990 CYB5R4Q7L1T6 521 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 ACRBPQ8NEB7 543 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
THBS3-211ENST00000541990 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 CASP1P29466 404 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 DHX8Q14562 1220 aaKnown RBP10.35□□□□□ -0.75
THBS3-211ENST00000541990 CASP8Q14790 479 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 TTF1Q15361 905 aaPredicted RBP10.35□□□□□ -0.75
THBS3-211ENST00000541990 AOC3Q16853 763 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 MFSD14BQ5SR56 506 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 JAKMIP3Q5VZ66 844 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 DZIP1Q86YF9 867 aaKnown RBP10.35□□□□□ -0.75
THBS3-211ENST00000541990 SLC35F6Q8N357 371 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 NAPBQ9H115 298 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
THBS3-211ENST00000541990 MAGEB6P1A0A0J9YX57 407 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 H0YIN7 160 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 DPEP1P16444 411 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 STX17P56962 302 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 RBL2Q08999 1139 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 USP49Q70CQ1 688 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 RIN2Q8WYP3 895 aaPredicted RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 GDAP1L1Q96MZ0 367 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 CDC23Q9UJX2 597 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 RAB21Q9UL25 225 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 G3V3G9 751 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 NMT2O60551 498 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 USP17L8P0C7I0 530 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 GTF2A1P52655 376 aaPredicted RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 UBE3CQ15386 1083 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 ICE2Q659A1 982 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 NCAPH2Q6IBW4 605 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 HDXQ7Z353 690 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 SLC44A5Q8NCS7 719 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 MSANTD4Q8NCY6 345 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 DYNLL2Q96FJ2 89 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 IRS2Q9Y4H2 1338 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 LAMB2P55268 1798 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 GOLGA6L9A6NEM1 432 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 USP17L12C9JPN9 530 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 USP17L21D6R901 530 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 CCDC175P0C221 793 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 CDC25AP30304 524 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 USP5P45974 858 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 MICU3Q86XE3 530 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 KIAA0825Q8IV33 1275 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 CERS5Q8N5B7 392 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 SH3RF3Q8TEJ3 882 aaPredicted RBP10.34□□□□□ -0.75
THBS3-211ENST00000541990 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 FAM204AQ9H8W3 233 aa10.34□□□□□ -0.75
THBS3-211ENST00000541990 BBOX1O75936 387 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 ZFYP08048 801 aaPredicted RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 NPR1P16066 1061 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 PICALMQ13492 652 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 FAM47AQ5JRC9 791 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 KLHL10Q6JEL2 608 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 APTXQ7Z2E3 356 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 SMYD4Q8IYR2 804 aaPredicted RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 HNRNPLLQ8WVV9 542 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 MASTLQ96GX5 879 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 ZNF512BQ96KM6 892 aaPredicted RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 RIOK1Q9BRS2 568 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 ZC3H12CQ9C0D7 883 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 ATP6V0A2Q9Y487 856 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 POLR2DO15514 142 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 NR1I3Q14994 352 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 TTC31Q49AM3 519 aaPredicted RBP10.33□□□□□ -0.76
THBS3-211ENST00000541990 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 RABEP2Q9H5N1 569 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 TRIM10Q9UDY6 481 aa10.33□□□□□ -0.76
THBS3-211ENST00000541990 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 AKR1B15C9JRZ8 316 aaPredicted RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 RNF225M0QZC1 329 aaPredicted RBP10.32□□□□□ -0.76
THBS3-211ENST00000541990 PPP6R2O75170 966 aa10.32□□□□□ -0.76
THBS3-211ENST00000541990 LDHBP07195 334 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms