RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 CABP5Q9NP86 173 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 VPS54Q9P1Q0 977 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 TBX2Q13207 712 aaPredicted RBP18.8■□□□□ 0.6
PDCD2-208ENST00000541970 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 CEP57Q86XR8 500 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 CTCFLQ8NI51 663 aaPredicted RBP18.8■□□□□ 0.6
PDCD2-208ENST00000541970 CEP89Q96ST8 783 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 FBXO3Q9UK99 471 aa18.8■□□□□ 0.6
PDCD2-208ENST00000541970 GOLGA6BA6NDN3 693 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 USP17L12C9JPN9 530 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 USP17L21D6R901 530 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 POSTNQ15063 836 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 PPP2R5AQ15172 486 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 STAMQ92783 540 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
PDCD2-208ENST00000541970 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 CAPS2Q9BXY5 557 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 CD248Q9HCU0 757 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 NBPF3Q9H094 633 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 VPS16Q9H269 839 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 HPCAL4Q9UM19 191 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 STRCP1A6NGW2 1772 aa18.79■□□□□ 0.6
PDCD2-208ENST00000541970 SCP2P22307 547 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 MMP14P50281 582 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 IRAK1P51617 712 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 WHAMMP3Q1A5X7 153 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 DACH1Q9UI36 760 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 CCNL1Q9UK58 526 aaPredicted RBP18.78■□□□□ 0.6
PDCD2-208ENST00000541970 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
PDCD2-208ENST00000541970 NMT2O60551 498 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 RFC4P35249 363 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 EVX2Q03828 476 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
PDCD2-208ENST00000541970 KCTD16Q68DU8 428 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 SND1Q7KZF4 910 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDCD2-208ENST00000541970 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 PPARAQ07869 468 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 ADGRA1Q86SQ6 560 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 KRT23Q9C075 422 aa18.78■□□□□ 0.6
PDCD2-208ENST00000541970 BCL9O00512 1426 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 N4BP3O15049 544 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 KCNV1Q6PIU1 500 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 F8W031 263 aaPredicted RBP18.77■□□□□ 0.6
PDCD2-208ENST00000541970 FXR1P51114 621 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDCD2-208ENST00000541970 GRIN1Q05586 938 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 PDCLQ13371 301 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDCD2-208ENST00000541970 MCM9Q9NXL9 1143 aa18.77■□□□□ 0.6
PDCD2-208ENST00000541970 ZMYM6O95789 1325 aa18.77■□□□□ 0.59
PDCD2-208ENST00000541970 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 GPIHBP1Q8IV16 184 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 VGLL2Q8N8G2 317 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 LINC00116Q8NCU8 138 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 TNKSO95271 1327 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 ATP2C2O75185 946 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 PRDX5P30044 214 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 ACTN3Q08043 901 aaPredicted RBP18.76■□□□□ 0.59
PDCD2-208ENST00000541970 ESR2Q92731 530 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 MMS19Q96T76 1030 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 PSMB7Q99436 277 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 SLC24A3Q9HC58 644 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 DONSONQ9NYP3 566 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
PDCD2-208ENST00000541970 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
PDCD2-208ENST00000541970 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
PDCD2-208ENST00000541970 STX8Q9UNK0 236 aa18.76■□□□□ 0.59
PDCD2-208ENST00000541970 TTF2Q9UNY4 1162 aaKnown RBP18.76■□□□□ 0.59
PDCD2-208ENST00000541970 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 CYP2D6P10635 497 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 SWT1Q5T5J6 900 aaKnown RBP18.75■□□□□ 0.59
PDCD2-208ENST00000541970 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 TMEM87BQ96K49 555 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 SELENOOQ9BVL4 669 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 LY9Q9HBG7 655 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 PHRF1Q9P1Y6 1649 aaKnown RBP18.75■□□□□ 0.59
PDCD2-208ENST00000541970 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
PDCD2-208ENST00000541970 NF2P35240 595 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 KIAA1328Q86T90 577 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 COG1Q8WTW3 980 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 RNF41Q9H4P4 317 aaPredicted RBP18.75■□□□□ 0.59
PDCD2-208ENST00000541970 CNNM2Q9H8M5 875 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 VAT1LQ9HCJ6 419 aa18.75■□□□□ 0.59
PDCD2-208ENST00000541970 RTCBQ9Y3I0 505 aaKnown RBP18.75■□□□□ 0.59
PDCD2-208ENST00000541970 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
PDCD2-208ENST00000541970 CATIPQ7Z7H3 387 aa18.74■□□□□ 0.59
PDCD2-208ENST00000541970 KRI1Q8N9T8 703 aaKnown RBP18.74■□□□□ 0.59
PDCD2-208ENST00000541970 PANX2Q96RD6 677 aa18.74■□□□□ 0.59
PDCD2-208ENST00000541970 MRC1P22897 1456 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms