RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 TDRD7Q8NHU6 1098 aaKnown RBP9.61□□□□□ -0.87
LMO3-226ENST00000541589 WNT2BQ93097 391 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 GUCD1Q96NT3 240 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 ZMYND8Q9ULU4 1186 aaPredicted RBP9.61□□□□□ -0.87
LMO3-226ENST00000541589 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 EYSQ5T1H1 3165 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
LMO3-226ENST00000541589 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FOXP2O15409 715 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 ELNP15502 786 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 GYG1P46976 350 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FLT3LGP49771 235 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
LMO3-226ENST00000541589 GPAT2Q6NUI2 795 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FBXO33Q7Z6M2 555 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FAM83AQ86UY5 434 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 C7orf61Q8IZ16 206 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
LMO3-226ENST00000541589 FAM198AQ9UFP1 575 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 DENND2AQ9ULE3 1009 aa9.6□□□□□ -0.87
LMO3-226ENST00000541589 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.6□□□□□ -0.87
LMO3-226ENST00000541589 PTMSP20962 102 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 INPP5BP32019 993 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 CACNB3P54284 484 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 PRSS12P56730 875 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 HDLBPQ00341 1268 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 GRIK5Q16478 980 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 IMMTQ16891 758 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 FKBP1CQ5VVH2 108 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 STOX1Q6ZVD7 989 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 PARK7Q99497 189 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 ZNF112Q9UJU3 913 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 ZMYM6O95789 1325 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 E7EWF7 191 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 LARGE1O95461 756 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 FGAP02671 866 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 CYP2C8P10632 490 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 SYN1P17600 705 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 TOB2Q14106 344 aaPredicted RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 HOOK2Q96ED9 719 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 STRBPQ96SI9 672 aaKnown RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 ZNF341Q9BYN7 854 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
LMO3-226ENST00000541589 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
LMO3-226ENST00000541589 LAMA2P24043 3122 aaKnown RBP9.58□□□□□ -0.88
LMO3-226ENST00000541589 IGSF3O75054 1194 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 GNAT2P19087 354 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 PTPN5P54829 565 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 COL9A3Q14050 684 aaPredicted RBP9.58□□□□□ -0.88
LMO3-226ENST00000541589 ALX1Q15699 326 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 ME3Q16798 604 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 NOL9Q5SY16 702 aaKnown RBP9.58□□□□□ -0.88
LMO3-226ENST00000541589 DCAF15Q66K64 600 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
LMO3-226ENST00000541589 MRIQ9BWK5 157 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
LMO3-226ENST00000541589 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.58□□□□□ -0.88
LMO3-226ENST00000541589 TPCN1Q9ULQ1 816 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 SMC3Q9UQE7 1217 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 MGAMO43451 1857 aa9.58□□□□□ -0.88
LMO3-226ENST00000541589 PRUNE2Q8WUY3 3088 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 PATL2C9JE40 543 aaKnown RBP9.57□□□□□ -0.88
LMO3-226ENST00000541589 GOLGA6L22H0YM25 854 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 CXCL11O14625 94 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 ZNF213O14771 459 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 MBD4O95243 580 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 BRD1O95696 1058 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 EXOSC10Q01780 885 aaKnown RBP9.57□□□□□ -0.88
LMO3-226ENST00000541589 PKP1Q13835 747 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 APOBEC3HQ6NTF7 200 aaKnown RBP9.57□□□□□ -0.88
LMO3-226ENST00000541589 Q6ZUG5 572 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 MIGA2Q7L4E1 593 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 PACS2Q86VP3 889 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 CCDC83Q8IWF9 413 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 ZFRQ96KR1 1074 aaKnown RBP9.57□□□□□ -0.88
LMO3-226ENST00000541589 TCEANC2Q96MN5 208 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 ZDHHC15Q96MV8 337 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 AGXT2Q9BYV1 514 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
LMO3-226ENST00000541589 ZDHHC9Q9Y397 364 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 WDR19Q8NEZ3 1342 aa9.57□□□□□ -0.88
LMO3-226ENST00000541589 MYO5AQ9Y4I1 1855 aaKnown RBP9.56□□□□□ -0.88
LMO3-226ENST00000541589 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 BAG4O95429 457 aaKnown RBP9.56□□□□□ -0.88
LMO3-226ENST00000541589 APPP05067 770 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
LMO3-226ENST00000541589 CYP7A1P22680 504 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 FBXL16Q8N461 479 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 NCOA7Q8NI08 942 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 TEKT1Q969V4 418 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms