RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 STAMQ92783 540 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 SLC4A4Q9Y6R1 1079 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 NID2Q14112 1375 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 WNT7AO00755 349 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 MAP3K12Q12852 859 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 BEND6Q5SZJ8 279 aaPredicted RBP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 CDKAL1Q5VV42 579 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 RASGRP2Q7LDG7 609 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 ZNF654Q8IZM8 581 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
PHACTR3-209ENST00000541461 ERICH2A1L162 156 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 TRIM75PA6NK02 468 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 PRDM1O75626 825 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 GYPCP04921 128 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 RHOXF2BP0C7M4 288 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 CCT6AP40227 531 aaKnown RBP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 LMAN1P49257 510 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 DPYDQ12882 1025 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 ZSCAN26Q16670 478 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 NBPF5PQ86XG9 351 aaPredicted RBP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 CEP112Q8N8E3 955 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 LPIN2Q92539 896 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 RHOXF2Q9BQY4 288 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 AATFQ9NY61 560 aaKnown RBP eCLIP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 MYH3P11055 1940 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 FGFR2P21802 821 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 CDC25AP30304 524 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
PHACTR3-209ENST00000541461 CCDC196A0A1B0GTZ2 297 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 CTAGE9A4FU28 777 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 DDR1Q08345 913 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 ZNF174Q15697 407 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 MUM1L1Q5H9M0 696 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 HNRNPLLQ8WVV9 542 aaKnown RBP11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 VPS18Q9P253 973 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 RAB21Q9UL25 225 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 VGLL3A8MV65 326 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 ERVK-24P63145 666 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 PKN1Q16512 942 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 HDXQ7Z353 690 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 MSANTD4Q8NCY6 345 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 EXOC4Q96A65 974 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 CTAGE1Q96RT6 745 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 NACAP1Q9BZK3 213 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 BLZF1Q9H2G9 400 aa11.92□□□□□ -0.5
PHACTR3-209ENST00000541461 TAF1P21675 1872 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 MINDY4BA8MYZ0 360 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 PDE8AO60658 829 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 TM4SF1P30408 202 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 USP5P45974 858 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 CNGA4Q8IV77 575 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 TMTC2Q8N394 836 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 GSDMAQ96QA5 445 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 VPS16Q9H269 839 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 FEZ2Q9UHY8 353 aaPredicted RBP11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 L1RE1Q9UN81 338 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 SLC5A1P13866 664 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 BCAMP50895 628 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 VSNL1P62760 191 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 KRT31Q15323 416 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 PHF20Q9BVI0 1012 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 V9GY48 417 aaPredicted RBP11.91□□□□□ -0.5
PHACTR3-209ENST00000541461 BAZ2BQ9UIF8 2168 aaKnown RBP11.9□□□□□ -0.5
PHACTR3-209ENST00000541461 N4BP3O15049 544 aa11.9□□□□□ -0.5
PHACTR3-209ENST00000541461 SERPINB2P05120 415 aa11.9□□□□□ -0.5
PHACTR3-209ENST00000541461 KRT2P35908 639 aa11.9□□□□□ -0.5
PHACTR3-209ENST00000541461 PPARAQ07869 468 aa11.9□□□□□ -0.5
PHACTR3-209ENST00000541461 TPTE2Q6XPS3 522 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms