RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
HMGA2-210ENST00000541363 TTI1O43156 1089 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 NLRP12P59046 1061 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
HMGA2-210ENST00000541363 TEX12Q9BXU0 123 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 POLD1P28340 1107 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 HECW1Q76N89 1606 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 CUTAO60888 179 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 RPSAP08865 295 aaKnown RBP16.83■□□□□ 0.28
HMGA2-210ENST00000541363 EEF1GP26641 437 aaKnown RBP16.83■□□□□ 0.28
HMGA2-210ENST00000541363 ZBTB41Q5SVQ8 909 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 TSC1Q92574 1164 aa16.83■□□□□ 0.28
HMGA2-210ENST00000541363 NR1H4Q96RI1 486 aaPredicted RBP16.83■□□□□ 0.28
HMGA2-210ENST00000541363 MAP3K7O43318 606 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 HERC4Q5GLZ8 1057 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 SPZ1Q9BXG8 430 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 PSDA5PKW4 1024 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 H3BRJ5 948 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 TRIM59Q8IWR1 403 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 CDV3Q9UKY7 258 aaKnown RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 KCNK3O14649 394 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 LMNAP02545 664 aaKnown RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 OCM2P0CE71 109 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 OCMP0CE72 109 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 SCYL3Q8IZE3 742 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 TRIML1Q8N9V2 468 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 LSM14BQ9BX40 385 aaKnown RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 DEUP1Q05D60 604 aa16.82■□□□□ 0.28
HMGA2-210ENST00000541363 PACSIN2Q9UNF0 486 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-210ENST00000541363 ATG16L1Q676U5 607 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 TMCO5AQ8N6Q1 288 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 STAT1P42224 750 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 ATP1A2P50993 1020 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 ART3Q13508 389 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 MYRIPQ8NFW9 859 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 EP400NLQ6ZTU2 488 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 PALMDQ9NP74 551 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 ZBED4O75132 1171 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.81■□□□□ 0.28
HMGA2-210ENST00000541363 A6NJR5 290 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 TNNC2P02585 160 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 GLE1Q53GS7 698 aaKnown RBP16.81■□□□□ 0.28
HMGA2-210ENST00000541363 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 ANGPTL2Q9UKU9 493 aa16.81■□□□□ 0.28
HMGA2-210ENST00000541363 RNF207Q6ZRF8 634 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 CAPN12Q6ZSI9 719 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 HOOK2Q96ED9 719 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 FAM95CA0A1B0GW59 222 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 C16orf87Q6PH81 154 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
HMGA2-210ENST00000541363 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 TUBB6Q9BUF5 446 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 TMEM247A6NEH6 219 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 IFNA8P32881 189 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 PDE6CP51160 858 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 FAM193BQ96PV7 902 aaPredicted RBP16.8■□□□□ 0.28
HMGA2-210ENST00000541363 POSTNQ15063 836 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 TRMT10CQ7L0Y3 403 aaKnown RBP16.8■□□□□ 0.28
HMGA2-210ENST00000541363 SLF1Q9BQI6 1058 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 BEGAINQ9BUH8 593 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 PCYT1AP49585 367 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 MRFAP1L1Q96HT8 127 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 SERPINI1Q99574 410 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 SKAP1Q86WV1 359 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
HMGA2-210ENST00000541363 PLEKHA4Q9H4M7 779 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 CAPN11Q9UMQ6 739 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 KDM3AQ9Y4C1 1321 aa16.8■□□□□ 0.28
HMGA2-210ENST00000541363 ZFXP17010 805 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 ZNF75DP51815 510 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 ZC3H12BQ5HYM0 836 aaKnown RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 MMS19Q96T76 1030 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 COPG1Q9Y678 874 aaKnown RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TRIM37O94972 964 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 PUM3Q15397 648 aaKnown RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TTC38Q5R3I4 469 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 KAZNQ674X7 775 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 KPNA2P52292 529 aaKnown RBP16.79■□□□□ 0.28
HMGA2-210ENST00000541363 OCA2Q04671 838 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 BFSP1Q12934 665 aa16.79■□□□□ 0.28
HMGA2-210ENST00000541363 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms