RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PHBP35232 272 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 DPCR1Q3MIW9 517 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
SMARCA4-207ENST00000541122 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 FNBP1Q96RU3 617 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 CCDC13Q8IYE1 715 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 SMIM24O75264 130 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 SMTNP53814 917 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 CALCRLQ16602 461 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 ARL1P40616 181 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 ADCY7P51828 1080 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 ENOX1Q8TC92 643 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 VPS37BQ9H9H4 285 aa16.48■□□□□ 0.23
SMARCA4-207ENST00000541122 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 RFC1P35251 1148 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 SCRN1Q12765 414 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 GABPB2Q8TAK5 448 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 ZKSCAN8Q15776 578 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 BZW2Q9Y6E2 419 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 TBC1D8O95759 1140 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 DZIP3Q86Y13 1208 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 WHAMMQ8TF30 809 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 HAUS7Q99871 368 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 KDRP35968 1356 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 U2AF1L4Q8WU68 220 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 STAMQ92783 540 aa16.47■□□□□ 0.23
SMARCA4-207ENST00000541122 H2AFZP0C0S5 128 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 H2AFVQ71UI9 128 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 MRRFQ96E11 262 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 CUEDC2Q9H467 287 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 OPHN1O60890 802 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 BIRC3Q13489 604 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 GALNT17Q6IS24 598 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 EMBQ6PCB8 327 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 ZNF790Q6PG37 636 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 DYMQ7RTS9 669 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 ATP2A3Q93084 1043 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 ADAM21Q9UKJ8 722 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 STK10O94804 968 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 ZNF827Q17R98 1081 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 KCTD16Q68DU8 428 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 LPIN2Q92539 896 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 JPH2Q9BR39 696 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 HMGB1P1B2RPK0 211 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 CHUKO15111 745 aa16.46■□□□□ 0.23
SMARCA4-207ENST00000541122 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 HOXA7P31268 230 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 IL9RQ01113 521 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 RBL2Q08999 1139 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 ITGA6P23229 1130 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 MAN1A1P33908 653 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 PLS1Q14651 629 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 RILPQ96NA2 401 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 RIC8AQ9NPQ8 531 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 HEXIM1O94992 359 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 DPH5Q9H2P9 285 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 BUB1O43683 1085 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 HSPD1P10809 573 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 NNTQ13423 1086 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
SMARCA4-207ENST00000541122 SNX16P57768 344 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 PICALMQ13492 652 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 PPP1R21Q6ZMI0 780 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 NBPF9Q3BBW0 867 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 LINC00301Q8NCQ3 95 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 KRT12Q99456 494 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 FOXP1Q9H334 677 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 DTNBO60941 627 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 TAF5LO75529 589 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 GUCY2CP25092 1073 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms