RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 EHD4Q9H223 541 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 CASS4Q9NQ75 786 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
PRKDC-209ENST00000540819 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
PRKDC-209ENST00000540819 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 DIAPH1O60610 1272 aaKnown RBP6.88□□□□□ -1.31
PRKDC-209ENST00000540819 LMNB2Q03252 620 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 SSRP1Q08945 709 aaKnown RBP6.88□□□□□ -1.31
PRKDC-209ENST00000540819 RAPGEF1Q13905 1077 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 SEPT6Q14141 434 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 CYP27C1Q4G0S4 372 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 TMEM67Q5HYA8 995 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 CBLL1Q75N03 491 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 C14orf80Q86SX3 495 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 GOLM1Q8NBJ4 401 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 TTC8Q8TAM2 541 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 ACSS3Q9H6R3 686 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 FAM105AQ9NUU6 356 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 PFDN2Q9UHV9 154 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 SLC5A6Q9Y289 635 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 DAGLAQ9Y4D2 1042 aa6.88□□□□□ -1.31
PRKDC-209ENST00000540819 A0A087X0B3 334 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 EXOC5O00471 708 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 PF4P02776 101 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 CTSBP07858 339 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 CRKP46108 304 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 GUCY2FP51841 1108 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 NEK2P51955 445 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 CAMK2GQ13555 558 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-209ENST00000540819 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-209ENST00000540819 KIAA0319Q5VV43 1072 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 LARP1BQ659C4 914 aaKnown RBP6.87□□□□□ -1.31
PRKDC-209ENST00000540819 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 OGFOD3Q6PK18 319 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 LGR6Q9HBX8 967 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
PRKDC-209ENST00000540819 E2F8A0AVK6 867 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 AKAP10O43572 662 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 PDE8AO60658 829 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 AOC2O75106 756 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 RFPL3O75679 317 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 GJB6O95452 261 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 B3GALT4O96024 378 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 LIG1P18858 919 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 MAN1A1P33908 653 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 LIG3P49916 1009 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 RAB27AP51159 221 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 CASP7P55210 303 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 AP3B2Q13367 1082 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 MAP3K11Q16584 847 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 C21orf62-AS1Q17RA5 79 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 LONRF2Q1L5Z9 754 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 ZC3H12BQ5HYM0 836 aaKnown RBP6.86□□□□□ -1.31
PRKDC-209ENST00000540819 NFXL1Q6ZNB6 911 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 FAM196AQ6ZSG2 479 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 SPATC1Q76KD6 591 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 RNF180Q86T96 592 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 FAM9BQ8IZU0 186 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 STK11IPQ8N1F8 1099 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 GLIS3Q8NEA6 775 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 ATL2Q8NHH9 583 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 FERD3LQ96RJ6 166 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 LRRC3Q9BY71 257 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 PAK6Q9NQU5 681 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-209ENST00000540819 ZIM2Q9NZV7 527 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 MAPRE3Q9UPY8 281 aa6.86□□□□□ -1.31
PRKDC-209ENST00000540819 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 GOLGA6CA6NDK9 693 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 GOLGA6BA6NDN3 693 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 BIN1O00499 593 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 SLFN14P0C7P3 912 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 GOLGA6DP0CG33 693 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 CPEP16870 476 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 HNRNPUQ00839 825 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRKDC-209ENST00000540819 LMOD3Q0VAK6 560 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 MORC3Q14149 939 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 SEZ6Q53EL9 994 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 KSR2Q6VAB6 950 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 SLC26A8Q96RN1 970 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 ASPSCR1Q9BZE9 553 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 GOLGA6AQ9NYA3 693 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 TLR6Q9Y2C9 796 aa6.85□□□□□ -1.31
PRKDC-209ENST00000540819 IRS4O14654 1257 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 NPHP1O15259 732 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 ECEL1O95672 775 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 IMPDH2P12268 514 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 ITGB5P18084 799 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 PABPC4Q13310 644 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 PLCL1Q15111 1095 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 MAPRE1Q15691 268 aaKnown RBP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 TMEM95Q3KNT9 176 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 C10orf62Q5T681 223 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-209ENST00000540819 FBXW10Q5XX13 1052 aa6.84□□□□□ -1.31
PRKDC-209ENST00000540819 NXNQ6DKJ4 435 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms